WormBase Tree Display for Sequence: F16H6

F16H6 DNA: F16H6 34378
  SMap: S_child: Gene_child: WBGene00185119 21461 23062
        WBGene00008897 19508 17401
        WBGene00200404 7992 7943
        WBGene00008891 1749 4505
        WBGene00008893 5643 8200
        WBGene00008894 9058 16152
        WBGene00008899 27421 32666
        WBGene00008898 26612 24014
      CDS_child: F16H6.1 1780 4456
        F16H6.3 5643 8200
        F16H6.4:wp227 9231 11091
        F16H6.4:wp245 9058 11091
        F16H6.4a 9058 13742
        F16H6.4b 9058 15763
        F16H6.5:wp227 12166 13742
        F16H6.5a:wp245 11902 13742
        F16H6.5b:wp245 11902 15763
        F16H6.6:wp227 15983 16333
        F16H6.6:wp245 15899 16333
        F16H6.7 19422 17659
        F16H6.7:wp176 18911 17519
        F16H6.7:wp237 19422 17519
        F16H6.8 26612 24014
        F16H6.8:wp184 25353 24014
        F16H6.9 27421 32636
        F16H6.10:wp51 34335 33240
        F16H6.11:wp230 22718 23060
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g104_x37_V_p 32295 32366
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g76_x37_V_m 18937 18890
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g48_x37_V_m 33483 33358
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g25s4k81_x37_V_m 17678 17522
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g26_x37_V_m 19422 17662
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g72_x37_V_p 607 1278
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g87_x37_V_p 257 304
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g56_x37_V_m 17641 17497
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g64_x37_V_p 3140 3250
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40_x37_V_m 19422 17662
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g65_x37_V_p 3423 3827
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g73_x37_V_m 17629 17539
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g50_x37_V_p 196 304
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g57_x37_V_p 2102 3089
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g37_x37_V_p 3540 3824
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g31_x37_V_m 34266 33395
        RNASEQ_embryo_him-8_20dC_post-L1_g46_x37_V_p 21606 22515
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g75_x37_V_p 15899 16330
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g98_x37_V_p 12313 12411
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g50_x37_V_p 3614 4360
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g59_x37_V_p 1780 3301
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g116_x37_V_m 18697 18635
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g62_x37_V_p 32013 32510
        RNASEQ_L4_soma_JK1107_no_DNaseI_g19_x37_V_m 19422 18494
        RNASEQ_L4_soma_JK1107_no_DNaseI_g46_x37_V_m 18448 17665
        RNASEQ_L4_soma_JK1107_no_DNaseI_g74_x37_V_p 1264 1354
        RNASEQ_L4_soma_JK1107_no_DNaseI_g55_x37_V_p 166 367
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g64_x37_V_p 3549 3836
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g98_x37_V_m 18655 18548
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g84_x37_V_p 622 1263
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g66_x37_V_m 19422 18810
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g101_x37_V_p 2125 3079
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g99_x37_V_p 466 606
        RNASEQ_early_embryo_g46_x37_V_p 22691 22861
        RNASEQ_early_embryo_g42_x37_V_p 21564 22557
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g42_x37_V_p 3614 3883
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g7_x37_V_p 1780 4453
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g55_x37_V_m 18445 17662
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g77_x37_V_m 19483 18937
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g12_x37_V_p 1780 4453
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g45_x37_V_m 18902 18632
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g49_x37_V_p 3614 4276
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g50_x37_V_p 1813 3334
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g69_x37_V_p 9702 9911
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g43_x37_V_m 18911 18458
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g65_x37_V_p 11902 12327
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g79_x37_V_m 18697 18644
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g80_x37_V_m 18395 17684
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g87_x37_V_p 21603 22437
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g131_x37_V_p 3636 3830
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g96_x37_V_m 33492 33358
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g79_x37_V_m 34266 33735
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g63_x37_V_m 18655 18548
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g56_x37_V_p 22402 22636
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g45_x37_V_m 19422 18804
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g98_x37_V_m 18697 18542
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g73_x37_V_m 18635 18537
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g94_x37_V_m 18445 18344
        F16H6.gc1 80 1384
        F16H6.gc2 1780 5345
        F16H6.gc3 5643 13040
        F16H6.gc4 16166 16458
        F16H6.gc5 25197 17519
        F16H6.gc6 25343 32636
        F16H6.gc7 34335 33550
        ContigV.elegans.jigsaw.4734.mRNA4734 19492 18317
        ContigV.elegans.jigsaw.4731.mRNA4731 1733 4507
        ContigV.elegans.jigsaw.4733.mRNA4733 9203 16361
        ContigV.elegans.jigsaw.4732.mRNA4732 5583 8249
        ContigV.elegans.jigsaw.4735.mRNA4735 26477 23994
        ContigV.elegans.jigsaw.4736.mRNA4736 27353 32670
        AG1201_F16H6.1.T1 1780 4456
        AG1201_F16H6.3.T1 5643 8200
        AG1201_F16H6.5.T7 9231 11041
        AG1201_F16H6.5.T6 9231 11088
        AG1201_F16H6.5.T1 9231 12781
        AG1201_F16H6.5.T5 9231 12781
        AG1201_F16H6.5.T9 9231 13742
        AG1201_F16H6.5.T4 9231 15763
        AG1201_F16H6.5.T8 9231 16333
        AG1201_F16H6.5.T3 11902 12781
        AG1201_F16H6.5.T2 12205 13665
        AG1201_F16H6.7.T3 18399 17519
        AG1201_F16H6.7.T4 18697 17659
        AG1201_F16H6.7.T1 19422 17659
        AG1201_F16H6.11.T1 21471 23060
        AG1201_F16H6.11.T2 22691 23060
        AG1201_F16H6.8.T1 24088 23829
        AG1201_F16H6.8.T2 25195 24431
        AG1201_F16H6.9.T2 28254 32636
        AG1201_F16H6.9.T1 32013 32636
      Transcript: F16H6.12 7992 7943
        F16H6.1.1 1749 4505
        F16H6.3.1 5643 8200
        F16H6.4a.1 9058 13922
        F16H6.4b.1 9058 16152
        F16H6.7.1 19508 17401
        F16H6.8.1 26612 24014
        F16H6.9.1 27421 32666
      Pseudogene: F16H6.11 21461 23062
      PCR_product (35)
      Allele (521)
      Oligo_set: Aff_F16H6.1 3857 4456
        Aff_F16H6.10 34335 33240
        Aff_F16H6.3 6732 8200
        Aff_F16H6.4 9231 11091
        Aff_F16H6.5 12166 13742
        Aff_F16H6.6 15983 16333
        Aff_F16H6.7 18869 17519
        Aff_F16H6.8 24661 24014
        Aff_F16H6.9 31994 32636
      Feature_object (85)
      Feature_data: F16H6:Polysome 1 34378
        F16H6:TranscriptionallyActiveRegion 1 34378
        F16H6:ChIPSeqTF 1 34378
        F16H6:TRF 1 34378
        F16H6:Dust 1 34378
        F16H6:inverted 1 34378
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: Y37H2B 34270
    Overlap_left: C31G12
    Clone_right_end: C31G12 24487
  DB_info: Database: EMBL NDB_AC Z81506
        NDB_SV Z81506.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Matthews L
    From_laboratory: HX
    Date_directory: 970210
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F16H6
  Properties: Genomic_canonical
    Checksum: MD5: 0c1c8735809131e84d3238f5db61a643
    Status: Finished: 10 Feb 1997 00:00:00
      Submitted: 06 Nov 1996 00:00:00
      Annotated: 01 Jan 1980 00:00:00
  Map: Sequence-V Ends: Left: 10520
        Right: 10532
  Interpolated_map_position: V 14.7952
  Assembly_tags: Finished Left 1 4
    Clone left end 1 4 F16H6
    Clone right end 24484 24487 C13G12
      34375 34378 F16H6
    Finished Right 34375 34378
    annotation 21407 21444 Single clone region. Assembly confirmed by digest.
      29356 29410 Single clone region. Confirmed by restriction digest.
  Method: Genomic_canonical