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WormBase Tree Display for CDS: F02A9.6

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Name Class

F02A9.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCHROMOSOME_III
StructureSource_exons1140
10011116
17571819
23393247
35483788
40944829
52375709
57606843
68957020
DB_infoDatabaseSwissProtUniProtAccP13508
UniProtUniProtAccP13508
UniProt_GCRPUniProtAccP13508
AlphaFoldentryP13508
NCBI_proteinGI_numberGI:3875450
TREEFAMTREEFAM_IDTF351641
Protein_idCHROMOSOME_IIICAA796201
DB_remarkGLP-1 protein; contains similarity to Pfam domains PF00008 (EGF-like domain), PF00023 (Ankyrin repeat), PF00066 (LNR domain), PF06816 (NOTCH protein), PF07684 (NOTCH protein), PF12796 (Ankyrin repeats (3 copies)); contains similarity to Interpro domains IPR011656 (Notch, NODP domain), IPR002110 (Ankyrin repeat), IPR001881 (EGF-like calcium-binding domain), IPR000800 (Notch domain), IPR035993 (Notch-like domain superfamily), IPR000742 (EGF-like domain), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR010660 (Notch, NOD domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00001609
Corresponding_transcriptF02A9.6.1
Corresponding_proteinCE00237
Corresponding_PCR_productTH:320A6
TH:335D6
cenix:320-a6
cenix:335-d6
mv_AAA28058
sjj_F02A9.6
Corresponding_oligo_set (17)
Matching_cDNA (48)
RNAi_result (61)
Microarray_results (18)
Brief_identificationglp-1/Notch intracellular domainAccession_evidenceUniProtSP:P13508
RNASeq_FPKM (74)
Associated_featureWBsf027615
Methodcurated