WormBase Tree Display for Operon: CEOP1988
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CEOP1988 | SMap | S_parent | Canonical_parent | CHROMOSOME_I | |
---|---|---|---|---|---|
Species | Caenorhabditis elegans | ||||
Contains_gene | WBGene00001234 | SL1 | Feature_evidence | WBsf011146 | |
WBGene00004196 | SL1 | Feature_evidence | WBsf021802 | ||
SL2 | Feature_evidence | WBsf021488 | |||
Description | C. elegans Deprecated Operon, this was previously seen as an active operon. | ||||
Method | Deprecated_operon | ||||
History | Deprecated | [110322 pad] Deprecated following 2010 re-analysis based on RNASeq data. | Person_evidence | WBPerson71 | |
Curator_confirmed | WBPerson1983 | ||||
Remark | [090713 pad] New operon defined by SL1 and SL2 data as identified by RNAseq deep sequencing data produced by Hillier L. et al. | Person_evidence | WBPerson71 | ||
From_analysis | modENCODE_Waterston_RNAseq | ||||
[110322 pad] This operon has been re-assesed based on the modENCODE Waterston RNASeq data. The number of SL2 reads for each downstream gene in these operons does not achieve the 5% cutoff so has been removed from the operon set. | Person_evidence | WBPerson71 | |||
Curator_confirmed | WBPerson1983 | ||||
From_analysis | RNASeq_Hillier_elegans |