WormBase Tree Display for CDS: CBG22292b
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CBG22292b | SMap | S_parent | Sequence | cb25.fpc4321 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 336 | ||
519 | 647 | ||||
698 | 850 | ||||
905 | 1092 | ||||
2085 | 2139 | ||||
2244 | 2522 | ||||
DB_info | DB_remark | CBR-UNC-57 protein; contains similarity to Pfam domains PF00018 (SH3 domain), PF03114 (BAR domain); contains similarity to Interpro domains IPR027267 (AH/BAR domain superfamily), IPR001452 (SH3 domain), IPR036028 (SH3-like domain superfamily), IPR028501 (), IPR004148 (BAR domain) | |||
Origin | From_laboratory | CB | |||
Species | Caenorhabditis briggsae | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Curator_confirmed | WBPerson4025 | |||
Visible | Gene | WBGene00040890 | |||
Corresponding_transcript | CBG22292b.1 | ||||
Corresponding_protein | CBP40402 | ||||
Corresponding_oligo_set | GPL8303_CB6_WBGene00040890_A | ||||
GPL8303_CB6_WBGene00040890_C | |||||
GPL14143_CBG22292_704-763_0.785_69_C | |||||
GPL14143_CBG22292_976-1035_0.952_2_B | |||||
GPL14143_CBG22292_993-1052_0.948_3_A | |||||
Microarray_results | GPL8303_CB6_WBGene00040890_A | ||||
GPL8303_CB6_WBGene00040890_C | |||||
GPL14143_CBG22292_704-763_0.785_69_C | |||||
GPL14143_CBG22292_976-1035_0.952_2_B | |||||
GPL14143_CBG22292_993-1052_0.948_3_A | |||||
RNASeq_FPKM (9) | |||||
Last_reviewed | 31 Aug 2016 10:21:14 | WBPerson4025 | |||
Remark | [160826 gw3] This structure has been created based on the Trinity model 'briggsae_GG3885|c2_g1_i2-chrI-1.extended'. | Curator_confirmed | WBPerson4025 | ||
Method | curated |