WormBase Tree Display for CDS: C54G7.2
expand all nodes | collapse all nodes | view schema
| C54G7.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C54G7 | |||
| Structure | Source_exons | 1 | 81 | |||
| 135 | 280 | |||||
| 350 | 427 | |||||
| 1127 | 1376 | |||||
| 1424 | 1715 | |||||
| 1766 | 2070 | |||||
| 2338 | 2628 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EC53 | ||
| UniProt | UniProtAcc | G5EC53 | ||||
| UniProt_GCRP | UniProtAcc | G5EC53 | ||||
| AlphaFold | entry | G5EC53 | ||||
| NCBI_protein | GI_number | GI:351059196 | ||||
| TREEFAM | TREEFAM_ID | TF314906 | ||||
| Protein_id | CHROMOSOME_X | CCD67044 | 1 | |||
| DB_remark | MBOA-3 protein; contains similarity to Pfam domain PF03062 (MBOAT, membrane-bound O-acyltransferase family); contains similarity to Interpro domain IPR004299 (Membrane bound O-acyl transferase, MBOAT) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00016934 | ||||
| Corresponding_transcript | C54G7.2.1 | |||||
| Corresponding_protein | CE04270 | |||||
| Corresponding_PCR_product | cenix:59-f7 | |||||
| mv_C54G7.2 | ||||||
| sjj_C54G7.2 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA (93) | ||||||
| RNAi_result | WBRNAi00012414 | |||||
| WBRNAi00030165 | ||||||
| WBRNAi00043190 | ||||||
| WBRNAi00107616 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | MBOAT family protein | Accession_evidence | UniProt | TR:G5EC53 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 31 Dec 2002 00:00:00 | WBPerson1867 | ||||
| Remark | [20021231 po] SL1 trans-spliced site; see yk1127b01.5 | Curator_confirmed | WBPerson1867 | |||
| Associated_feature | WBsf003191 | |||||
| Method | curated |
