WormBase Tree Display for Gene: WBGene00016934
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| WBGene00016934 | SMap | S_parent | Sequence | C54G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mboa-3 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | C54G7.2 | ||||||||
| Molecular_name | C54G7.2 | ||||||||
| C54G7.2.1 | |||||||||
| CE04270 | |||||||||
| Other_name | CELE_C54G7.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | mboa-3 | ||||||||
| DB_info | Database | AceView | gene | XG140 | |||||
| WormQTL | gene | WBGene00016934 | |||||||
| WormFlux | gene | WBGene00016934 | |||||||
| NDB | locus_tag | CELE_C54G7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016934|UniProtKB=G5EC53 | |||||||
| family | PTHR13906 | ||||||||
| NCBI | gene | 180824 | |||||||
| RefSeq | protein | NM_001383582.2 | |||||||
| TREEFAM | TREEFAM_ID | TF314906 | |||||||
| TrEMBL | UniProtAcc | G5EC53 | |||||||
| UniProt_GCRP | UniProtAcc | G5EC53 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Sep 2008 12:24:31 | WBPerson2970 | Name_change | CGC_name | mboa-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mboa | ||||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00011134 | ||||||||
| 00011135 | |||||||||
| 00011136 | |||||||||
| 00011137 | |||||||||
| 00011138 | |||||||||
| 00011139 | |||||||||
| 00011140 | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00003394 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007446 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008806 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020115 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | mboa-3 encodes a putative transmembrane O-acyl transferase (MBOAT) orthologous to human MBOAT1 (OMIM:611732), and paralogous to C08F8.4 and ZK550.1; MBOA-3 has no obvious function in mass RNAi assays, and mboa-3(RNAi) animals incorporate exogenous arachidonic acid into phosphatidylcholine (PC), phosphatidylserine (PS) and phosphatidylethanolamine (PE) normally. | Paper_evidence | WBPaper00027263 | |||||
| WBPaper00031342 | |||||||||
| WBPaper00032174 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 14 Oct 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable acyltransferase activity. Predicted to be involved in lipid modification. Predicted to be located in membrane. Is an ortholog of human MBOAT1 (membrane bound O-acyltransferase domain containing 1) and MBOAT2 (membrane bound O-acyltransferase domain containing 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54G7.2 | |||||||
| Corresponding_transcript | C54G7.2.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf653988 | ||||||||
| WBsf1005286 | |||||||||
| WBsf1005287 | |||||||||
| WBsf1022962 | |||||||||
| WBsf237380 | |||||||||
| WBsf237381 | |||||||||
| WBsf237382 | |||||||||
| WBsf237383 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012414 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030165 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043190 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107616 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014824 | ||||||||
| Expr1037264 | |||||||||
| Expr1147168 | |||||||||
| Expr2013436 | |||||||||
| Expr2031670 | |||||||||
| Drives_construct | WBCnstr00027696 | ||||||||
| Construct_product | WBCnstr00027696 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000402306 | ||||||||
| WBInteraction000416504 | |||||||||
| WBInteraction000583405 | |||||||||
| Map_info | Map | X | Position | -5.12058 | Error | 0.055972 | |||
| Positive | Positive_clone | C54G7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032174 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
