WormBase Tree Display for CDS: C40D2.2
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C40D2.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C40D2 | |||
Structure | Source_exons | 1 | 107 | |||
171 | 469 | |||||
513 | 639 | |||||
691 | 965 | |||||
1012 | 1126 | |||||
1530 | 1917 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O76558 | ||
UniProt | UniProtAcc | O76558 | ||||
UniProt_GCRP | UniProtAcc | O76558 | ||||
AlphaFold | entry | O76558 | ||||
NCBI_protein | GI_number | GI:351059234 | ||||
TREEFAM | TREEFAM_ID | TF322050 | ||||
Protein_id | CHROMOSOME_II | CCD67122 | 1 | |||
DB_remark | MATH-20 protein; contains similarity to Pfam domain PF00917 (MATH domain); contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH/TRAF domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00016555 | ||||
Corresponding_transcript | C40D2.2.1 | |||||
Corresponding_protein | CE19374 | |||||
Corresponding_PCR_product | cenix:234-b6 | |||||
mv_C40D2.2 | ||||||
sjj_C40D2.2 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (38) | ||||||
RNAi_result | WBRNAi00029705 | |||||
WBRNAi00021930 | ||||||
WBRNAi00042253 | ||||||
WBRNAi00042254 | ||||||
WBRNAi00011815 | ||||||
Microarray_results (15) | ||||||
Brief_identification | MATH domain-containing protein | Accession_evidence | UniProt | TR:O76558 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf009473 | |||||
Method | curated |