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WormBase Tree Display for CDS: C34F6.3

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Name Class

C34F6.3EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC34F6
StructureSource_exons1191
244904
DB_infoDatabaseTrEMBLUniProtAccO17642
UniProtUniProtAccO17642
UniProt_GCRPUniProtAccO17642
AlphaFoldentryO17642
NCBI_proteinGI_numberGI:3874798
Protein_idCHROMOSOME_XCAB039421
DB_remarkCOL-179 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000752
Corresponding_transcriptC34F6.3.1
Corresponding_proteinCE15672
Corresponding_PCR_productcenix:182-c3
mv_C34F6.3
sjj_C34F6.3
Corresponding_oligo_set (18)
Matching_cDNA (35)
RNAi_resultWBRNAi00011623
WBRNAi00023076
WBRNAi00115369
WBRNAi00029546
WBRNAi00041920
WBRNAi00114424
WBRNAi00065105
WBRNAi00011624
Microarray_results (19)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:O17642
RNASeq_FPKM (74)
Methodcurated