WormBase Tree Display for CDS: C34E11.2g
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| C34E11.2g | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C34E11 | |||
| Structure | Source_exons (13) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A4V0IIZ5 | ||
| UniProt | UniProtAcc | A0A4V0IIZ5 | ||||
| AlphaFold | entry | A0A4V0IIZ5 | ||||
| Protein_id | CHROMOSOME_X | VTW47503 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03166 (MH2 domain); contains similarity to Interpro domains IPR008984 (SMAD/FHA domain superfamily), IPR001132 (SMAD domain, Dwarfin-type), IPR017855 (SMAD-like domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Curator_confirmed | WBPerson4025 | ||||
| Visible | Gene | WBGene00007935 | ||||
| Corresponding_transcript | C34E11.2g.1 | |||||
| Corresponding_protein | CE53468 | |||||
| Corresponding_PCR_product | cenix:241-b12 | |||||
| mv_C34E11.2 | ||||||
| sjj_C34E11.2 | ||||||
| Corresponding_oligo_set (11) | ||||||
| Matching_cDNA | adult_Nanopore_Roach_45104 | |||||
| RNAi_result | WBRNAi00011609 | |||||
| WBRNAi00029532 | ||||||
| WBRNAi00041900 | ||||||
| Microarray_results (12) | ||||||
| Brief_identification | MH2 domain-containing protein | Accession_evidence | UniProt | TR:A0A4V0IIZ5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 23 Apr 2019 12:29:46 | WBPerson4025 | ||||
| Remark | [190423 gw3] This structure has been created based on the RNASeq data. | Curator_confirmed | WBPerson4025 | |||
| From_analysis | RNASeq | |||||
| Method | curated |
