WormBase Tree Display for CDS: C28H8.11c
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C28H8.11c | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C28H8 | |||
Structure | Source_exons | 1 | 100 | |||
314 | 552 | |||||
DB_info | Database | KEGG | KEGG_id | 1.13.11.11 | ||
SwissProt | UniProtAcc | Q09474 | ||||
UniProtIsoformAcc | Q09474-3 | |||||
UniProt | UniProtAcc | Q09474 | ||||
UniProt_GCRP | UniProtAcc | Q09474 | ||||
AlphaFold | entry | Q09474 | ||||
NCBI_protein | GI_number | GI:351058512 | ||||
Protein_id | CHROMOSOME_III | CCD65974 | 1 | |||
DB_remark | TDO-2 protein; contains similarity to Pfam domain PF03301 (Tryptophan 2,3-dioxygenase); contains similarity to Interpro domains IPR004981 (Tryptophan 2,3-dioxygenase), IPR037217 (Tryptophan/Indoleamine 2,3-dioxygenase-like) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Feature_evidence | WBsf020056 | ||||
Visible | Gene | WBGene00016201 | ||||
Corresponding_transcript | C28H8.11c.1 | |||||
Corresponding_protein | CE39680 | |||||
Corresponding_PCR_product | TH:304C2 | |||||
cenix:304-c2 | ||||||
mv_G_YK7593 | ||||||
sjj_C28H8.11 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (18) | ||||||
RNAi_result | WBRNAi00005315 | |||||
WBRNAi00041426 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Tryptophan 2,3-dioxygenase | Accession_evidence | UniProt | SP:Q09474 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |