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WormBase Tree Display for CDS: C27H6.1c

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Name Class

C27H6.1cSMapS_parentSequenceC27H6
StructureSource_exons1202
3751283
13341461
17052454
26263690
39484580
48745019
50665195
DB_infoDatabaseSwissProtUniProtAccP90761
UniProtIsoformAccP90761-3
UniProtUniProtAccP90761
UniProt_GCRPUniProtAccP90761
AlphaFoldentryP90761
NCBI_proteinGI_numberGI:306438314
Protein_idCHROMOSOME_VCBW483411
DB_remarkUNC-41 protein; contains similarity to Pfam domain PF00928 (Adaptor complexes medium subunit family); contains similarity to Interpro domains IPR028565 (Mu homology domain), IPR036168 (AP-2 complex subunit mu, C-terminal superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformFeature_evidenceWBsf189601
VisibleGeneWBGene00006777
Corresponding_transcriptC27H6.1c.1
Corresponding_proteinCE45298
Corresponding_PCR_productcenix:38-h7
mv_C27H6.1
sjj_C27H6.1
Corresponding_oligo_set (13)
Matching_cDNAL2_Nanopore_Roach_25940
L1_Nanopore_Roach_65529
RNAi_resultWBRNAi00089949
WBRNAi00063263
WBRNAi00090109
WBRNAi00089721
WBRNAi00011280
WBRNAi00090267
WBRNAi00041380
WBRNAi00098506
Microarray_results (14)
Brief_identificationPutative stoned B-like proteinAccession_evidenceUniProtSP:P90761
RNASeq_FPKM (74)
Last_reviewed13 Aug 2010 00:00:00WBPerson4025
Remark[100813 gw3] Created this isoform based on the SL1 feature.Feature_evidenceWBsf189601
Methodcurated