WormBase Tree Display for CDS: C13D9.7
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| C13D9.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C13D9 | |||
| Structure | Source_exons | 1 | 202 | |||
| 275 | 375 | |||||
| 800 | 931 | |||||
| 978 | 1157 | |||||
| 1207 | 1309 | |||||
| 1356 | 1739 | |||||
| 1792 | 2069 | |||||
| 2118 | 2235 | |||||
| 2285 | 2647 | |||||
| 2997 | 3247 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O16241 | ||
| UniProt | UniProtAcc | O16241 | ||||
| UniProt_GCRP | UniProtAcc | O16241 | ||||
| AlphaFold | entry | O16241 | ||||
| NCBI_protein | GI_number | GI:351057791 | ||||
| TREEFAM | TREEFAM_ID | TF323444 | ||||
| Protein_id | CHROMOSOME_V | CCD64393 | 1 | |||
| DB_remark | NCX-8 protein; contains similarity to Pfam domain PF01699 (Sodium/calcium exchanger protein); contains similarity to Interpro domains IPR044880 (NCX, central ion-binding domain superfamily), IPR004837 (Sodium/calcium exchanger membrane region) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003573 | ||||
| Corresponding_transcript | C13D9.7.1 | |||||
| Corresponding_protein | CE08140 | |||||
| Corresponding_PCR_product | cenix:22-e5 | |||||
| mv_C13D9.7 | ||||||
| sjj_C13D9.7 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (19) | ||||||
| RNAi_result | WBRNAi00023936 | |||||
| WBRNAi00010691 | ||||||
| WBRNAi00112438 | ||||||
| WBRNAi00023136 | ||||||
| WBRNAi00040442 | ||||||
| WBRNAi00023648 | ||||||
| WBRNAi00023043 | ||||||
| WBRNAi00112439 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Sodium/calcium exchanger membrane region domain-containing protein | Accession_evidence | UniProt | TR:O16241 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
