WormBase Tree Display for Sequence: C05C8
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| C05C8 | DNA | C05C8 | 32729 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (11) | ||||
| CDS_child (319) | ||||||
| Transcript (15) | ||||||
| Nongenomic | yk199f11 | 1356 | 2214 | |||
| yk214d6 | 2426 | 5509 | ||||
| yk396b8 | 10972 | 12755 | ||||
| [cgc5194]:gei-6 | 6834 | 2369 | ||||
| PCR_product (35) | ||||||
| Allele (420) | ||||||
| Oligo_set | Aff_C05C8.1 | 15406 | 18934 | |||
| Aff_C05C8.2 | 7886 | 8593 | ||||
| Aff_C05C8.3 | 1539 | 2213 | ||||
| Aff_C05C8.4 | 3825 | 2521 | ||||
| Aff_C05C8.5 | 9367 | 8721 | ||||
| Aff_C05C8.6 | 11867 | 11003 | ||||
| Aff_C05C8.7 | 20241 | 19410 | ||||
| Aff_C05C8.8 | 29802 | 28309 | ||||
| Feature_object (372) | ||||||
| Feature_data | C05C8:Polysome | 1 | 32729 | |||
| C05C8:TranscriptionallyActiveRegion | 1 | 32729 | ||||
| C05C8:ChIPSeqTF | 1 | 32729 | ||||
| C05C8:TRF | 1 | 32729 | ||||
| C05C8:Dust | 1 | 32729 | ||||
| C05C8:inverted | 1 | 32729 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | C13A2 | 32530 | ||||
| Overlap_left | C13F10 | |||||
| Clone_left_end | C05C8 | 1497 | ||||
| Clone_right_end | C13F10 | 16867 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080353 | ||
| NDB_ID | _AF016430 | |||||
| NDB_SV | FO080353.2 | |||||
| Secondary_accession | AF016430 | |||||
| DB_remark | The 5' clone is C13F10, 1500 bp overlap; the 3' clone is C13A2, 200 bp overlap. Actual start of this clone is at base position 1497 of C05C8; actual end is at 11015 of C13A2. | |||||
| [121025] Sequence correction: SNP 0 bases @ 21107 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Sammons L | ||||
| Wohldmann P | ||||||
| From_laboratory | RW | |||||
| Date | 16 Aug 1996 00:00:00 | |||||
| Date_directory | 960813 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C05C8 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 3dfd94f0af5f2c84fe8713c0fded14cc | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 16 Aug 1996 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | 0.645866 | ||||
| Method | Genomic_canonical |
