WormBase Tree Display for Sequence: C05C8
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| C05C8 | DNA | C05C8 | 32729 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (11) | ||||
| CDS_child (319) | ||||||
| Transcript (15) | ||||||
| Nongenomic | yk199f11 | 1356 | 2214 | |||
| yk214d6 | 2426 | 5509 | ||||
| yk396b8 | 10972 | 12755 | ||||
| [cgc5194]:gei-6 | 6834 | 2369 | ||||
| PCR_product (35) | ||||||
| Allele (420) | ||||||
| Oligo_set | Aff_C05C8.1 | 15406 | 18934 | |||
| Aff_C05C8.2 | 7886 | 8593 | ||||
| Aff_C05C8.3 | 1539 | 2213 | ||||
| Aff_C05C8.4 | 3825 | 2521 | ||||
| Aff_C05C8.5 | 9367 | 8721 | ||||
| Aff_C05C8.6 | 11867 | 11003 | ||||
| Aff_C05C8.7 | 20241 | 19410 | ||||
| Aff_C05C8.8 | 29802 | 28309 | ||||
| Feature_object | WBsf1000452 | 1066 | 1152 | |||
| WBsf1000453 | 6962 | 7112 | ||||
| WBsf1000454 | 13202 | 13352 | ||||
| WBsf1000455 | 16682 | 16737 | ||||
| WBsf1000456 | 24002 | 24152 | ||||
| WBsf1019907 | 6962 | 7112 | ||||
| WBsf1019908 | 24662 | 24812 | ||||
| WBsf000572 | 23035 | 23034 | ||||
| WBsf008828 | 10811 | 10810 | ||||
| WBsf014744 | 23035 | 23034 | ||||
| WBsf015456 | 23272 | 23271 | ||||
| WBsf015642 | 13115 | 13114 | ||||
| WBsf015683 | 23142 | 23141 | ||||
| WBsf015836 | 15754 | 15755 | ||||
| WBsf017439 | 17330 | 17335 | ||||
| WBsf017440 | 17350 | 17351 | ||||
| WBsf017442 | 8669 | 8670 | ||||
| WBsf019637 | 6833 | 6832 | ||||
| WBsf019663 | 7173 | 7174 | ||||
| WBsf022671 | 13398 | 13399 | ||||
| WBsf023188 | 28983 | 28982 | ||||
| WBsf023489 | 18899 | 18898 | ||||
| WBsf026464 | 18914 | 18909 | ||||
| WBsf026565 | 8661 | 8666 | ||||
| WBsf098033 | 2302 | 2302 | ||||
| WBsf098034 | 2362 | 2362 | ||||
| WBsf098035 | 8685 | 8685 | ||||
| WBsf098036 | 8712 | 8712 | ||||
| WBsf098037 | 10961 | 10961 | ||||
| WBsf098038 | 15575 | 15575 | ||||
| WBsf098039 | 17352 | 17352 | ||||
| WBsf098040 | 18888 | 18888 | ||||
| WBsf099103 | 2232 | 2232 | ||||
| WBsf099104 | 2441 | 2441 | ||||
| WBsf099105 | 8715 | 8715 | ||||
| WBsf099106 | 19394 | 19394 | ||||
| WBsf099664 | 7826 | 7826 | ||||
| WBsf099665 | 10657 | 10657 | ||||
| WBsf099942 | 9002 | 9002 | ||||
| WBsf100487 | 2311 | 2311 | ||||
| WBsf100488 | 8411 | 8411 | ||||
| WBsf100489 | 14110 | 14110 | ||||
| WBsf101154 | 2280 | 2280 | ||||
| WBsf101155 | 2436 | 2436 | ||||
| WBsf101156 | 8729 | 8729 | ||||
| WBsf101157 | 17298 | 17298 | ||||
| WBsf101800 | 2307 | 2307 | ||||
| WBsf101801 | 2359 | 2359 | ||||
| WBsf101802 | 10909 | 10909 | ||||
| WBsf101803 | 15646 | 15646 | ||||
| WBsf101804 | 17355 | 17355 | ||||
| WBsf101805 | 18889 | 18889 | ||||
| WBsf102613 | 8672 | 8672 | ||||
| WBsf102614 | 8910 | 8910 | ||||
| WBsf102615 | 10906 | 10906 | ||||
| WBsf102616 | 15615 | 15615 | ||||
| WBsf102617 | 17351 | 17351 | ||||
| WBsf103393 | 2242 | 2242 | ||||
| WBsf103394 | 5599 | 5599 | ||||
| WBsf103395 | 8612 | 8612 | ||||
| WBsf104707 | 2355 | 2355 | ||||
| WBsf104708 | 8625 | 8625 | ||||
| WBsf104709 | 8632 | 8632 | ||||
| WBsf104710 | 17300 | 17300 | ||||
| WBsf104711 | 18962 | 18962 | ||||
| WBsf129849 | 1328 | 1329 | ||||
| WBsf129850 | 15754 | 15755 | ||||
| WBsf130729 | 10811 | 10810 | ||||
| WBsf131052 | 7173 | 7174 | ||||
| WBsf131100 | 2219 | 2218 | ||||
| WBsf131211 | 13115 | 13114 | ||||
| WBsf189518 | 309 | 310 | ||||
| WBsf189592 | 23300 | 23299 | ||||
| WBsf189941 | 2441 | 2441 | ||||
| WBsf189942 | 8715 | 8715 | ||||
| WBsf189943 | 19394 | 19394 | ||||
| WBsf190667 | 8411 | 8411 | ||||
| WBsf191242 | 2362 | 2362 | ||||
| WBsf191243 | 8712 | 8712 | ||||
| WBsf191244 | 10961 | 10961 | ||||
| WBsf191245 | 18888 | 18888 | ||||
| WBsf191889 | 2355 | 2355 | ||||
| WBsf191890 | 8632 | 8632 | ||||
| WBsf191891 | 18962 | 18962 | ||||
| WBsf192130 | 10657 | 10657 | ||||
| WBsf192993 | 2443 | 2443 | ||||
| WBsf192994 | 8682 | 8682 | ||||
| WBsf192995 | 10948 | 10948 | ||||
| WBsf194141 | 2317 | 2317 | ||||
| WBsf194142 | 6474 | 6474 | ||||
| WBsf194143 | 8587 | 8587 | ||||
| WBsf194144 | 10275 | 10275 | ||||
| WBsf194145 | 12392 | 12392 | ||||
| WBsf194146 | 15537 | 15537 | ||||
| WBsf194701 | 2359 | 2359 | ||||
| WBsf194702 | 10909 | 10909 | ||||
| WBsf194703 | 18889 | 18889 | ||||
| WBsf195086 | 8910 | 8910 | ||||
| WBsf195087 | 10906 | 10906 | ||||
| WBsf195394 | 2577 | 2577 | ||||
| WBsf196196 | 2239 | 2239 | ||||
| WBsf196197 | 2458 | 2458 | ||||
| WBsf196198 | 8652 | 8652 | ||||
| WBsf196692 | 5599 | 5599 | ||||
| WBsf196693 | 8729 | 8729 | ||||
| WBsf197452 | 2220 | 2220 | ||||
| WBsf197453 | 2414 | 2414 | ||||
| WBsf197454 | 8732 | 8732 | ||||
| WBsf197455 | 10965 | 10965 | ||||
| WBsf197456 | 17289 | 17289 | ||||
| WBsf197457 | 19259 | 19259 | ||||
| WBsf197955 | 2436 | 2436 | ||||
| WBsf198155 | 1328 | 1329 | ||||
| WBsf203433 | 15641 | 15642 | ||||
| WBsf203743 | 2359 | 2358 | ||||
| WBsf204009 | 1052 | 1053 | ||||
| WBsf204103 | 8672 | 8673 | ||||
| WBsf231955 | 926 | 955 | ||||
| WBsf231956 | 926 | 1049 | ||||
| WBsf231957 | 2214 | 2278 | ||||
| WBsf231958 | 2214 | 2303 | ||||
| WBsf231959 | 8594 | 8668 | ||||
| WBsf231960 | 8594 | 8707 | ||||
| WBsf231961 | 15544 | 15641 | ||||
| WBsf231962 | 17281 | 17350 | ||||
| WBsf233925 | 2520 | 2361 | ||||
| WBsf233926 | 2520 | 2413 | ||||
| WBsf233927 | 8720 | 8307 | ||||
| WBsf233928 | 8720 | 8661 | ||||
| WBsf233929 | 8720 | 8696 | ||||
| WBsf233930 | 11002 | 10913 | ||||
| WBsf233931 | 11002 | 10952 | ||||
| WBsf233932 | 19409 | 18883 | ||||
| WBsf233933 | 19409 | 18900 | ||||
| WBsf233934 | 19409 | 19215 | ||||
| WBsf253008 | 1054 | 1055 | ||||
| WBsf253009 | 1004 | 1005 | ||||
| WBsf253010 | 2285 | 2286 | ||||
| WBsf253011 | 2360 | 2359 | ||||
| WBsf253012 | 2412 | 2411 | ||||
| WBsf253013 | 8733 | 8734 | ||||
| WBsf253014 | 8683 | 8684 | ||||
| WBsf253015 | 8660 | 8659 | ||||
| WBsf253016 | 10908 | 10907 | ||||
| WBsf253017 | 15583 | 15584 | ||||
| WBsf253018 | 18880 | 18879 | ||||
| WBsf253019 | 18947 | 18946 | ||||
| WBsf253020 | 19194 | 19193 | ||||
| WBsf253021 | 19341 | 19340 | ||||
| WBsf277238 | 2304 | 2305 | ||||
| WBsf277922 | 14456 | 14457 | ||||
| WBsf277945 | 8349 | 8350 | ||||
| WBsf277947 | 19858 | 19857 | ||||
| WBsf628849 | 15741 | 15742 | ||||
| WBsf628984 | 8658 | 8659 | ||||
| WBsf629817 | 2268 | 2269 | ||||
| WBsf630315 | 8606 | 8607 | ||||
| WBsf630858 | 17002 | 17003 | ||||
| WBsf631308 | 17304 | 17305 | ||||
| WBsf631706 | 16980 | 16979 | ||||
| WBsf633817 | 28226 | 28225 | ||||
| WBsf633856 | 4876 | 4875 | ||||
| WBsf633954 | 8677 | 8676 | ||||
| WBsf634105 | 19212 | 19211 | ||||
| WBsf634703 | 2261 | 2260 | ||||
| WBsf634723 | 8305 | 8304 | ||||
| WBsf635046 | 15710 | 15709 | ||||
| WBsf635731 | 1708 | 1709 | ||||
| WBsf970631 | 721 | 722 | ||||
| WBsf970632 | 842 | 843 | ||||
| WBsf970633 | 2219 | 2218 | ||||
| WBsf970635 | 6607 | 6608 | ||||
| WBsf970636 | 6708 | 6707 | ||||
| WBsf970637 | 6833 | 6832 | ||||
| WBsf970638 | 7982 | 7981 | ||||
| WBsf970639 | 12470 | 12469 | ||||
| WBsf970640 | 15374 | 15375 | ||||
| WBsf970641 | 15374 | 15375 | ||||
| WBsf970643 | 16718 | 16719 | ||||
| WBsf970644 | 17098 | 17097 | ||||
| WBsf970645 | 19582 | 19581 | ||||
| WBsf970646 | 20404 | 20403 | ||||
| WBsf970647 | 27407 | 27406 | ||||
| WBsf970648 | 30497 | 30496 | ||||
| WBsf970649 | 30507 | 30506 | ||||
| WBsf980599 | 10906 | 10905 | ||||
| WBsf037491 | 854 | 14252 | ||||
| WBsf499764 | 13179 | 13501 | ||||
| WBsf500161 | 6327 | 6372 | ||||
| WBsf500495 | 13238 | 13381 | ||||
| WBsf500727 | 2229 | 2392 | ||||
| WBsf501313 | 3525 | 7336 | ||||
| WBsf501491 | 13153 | 13526 | ||||
| WBsf501735 | 17385 | 17562 | ||||
| WBsf502047 | 953 | 2895 | ||||
| WBsf502081 | 22640 | 25043 | ||||
| WBsf502809 | 12985 | 13596 | ||||
| WBsf502943 | 884 | 1760 | ||||
| WBsf503434 | 6836 | 7298 | ||||
| WBsf503492 | 21615 | 22014 | ||||
| WBsf503733 | 13058 | 13558 | ||||
| WBsf503957 | 6853 | 7201 | ||||
| WBsf505515 | 12675 | 13771 | ||||
| WBsf505611 | 6511 | 7149 | ||||
| WBsf505723 | 13190 | 13436 | ||||
| WBsf505878 | 6889 | 7113 | ||||
| WBsf508592 | 13132 | 13677 | ||||
| WBsf508860 | 24597 | 25097 | ||||
| WBsf509199 | 23721 | 24338 | ||||
| WBsf509586 | 902 | 1385 | ||||
| WBsf509618 | 22973 | 23328 | ||||
| WBsf509818 | 17649 | 17848 | ||||
| WBsf509893 | 18077 | 18401 | ||||
| WBsf509904 | 6770 | 7180 | ||||
| WBsf509943 | 15143 | 15549 | ||||
| WBsf510207 | 26097 | 26462 | ||||
| WBsf510555 | 21358 | 21759 | ||||
| WBsf510653 | 15779 | 15968 | ||||
| WBsf511058 | 13113 | 13575 | ||||
| WBsf511366 | 13121 | 13592 | ||||
| WBsf511430 | 6908 | 7172 | ||||
| WBsf511661 | 24643 | 25048 | ||||
| WBsf511807 | 23879 | 24346 | ||||
| WBsf511831 | 23024 | 23677 | ||||
| WBsf511916 | 919 | 1598 | ||||
| WBsf512278 | 13149 | 13540 | ||||
| WBsf512412 | 1051 | 1741 | ||||
| WBsf512810 | 13149 | 13540 | ||||
| WBsf512960 | 1051 | 1741 | ||||
| WBsf513094 | 6835 | 7165 | ||||
| WBsf513602 | 12964 | 13455 | ||||
| WBsf513730 | 13136 | 13484 | ||||
| WBsf514233 | 13160 | 13495 | ||||
| WBsf515611 | 23107 | 24239 | ||||
| WBsf516093 | 13141 | 13456 | ||||
| WBsf516130 | 18719 | 19246 | ||||
| WBsf516509 | 6899 | 7131 | ||||
| WBsf516804 | 1014 | 1654 | ||||
| WBsf517187 | 13112 | 13483 | ||||
| WBsf517395 | 6910 | 7175 | ||||
| WBsf518164 | 6868 | 7153 | ||||
| WBsf518206 | 13129 | 13487 | ||||
| WBsf519533 | 12825 | 13468 | ||||
| WBsf520012 | 21689 | 22541 | ||||
| WBsf520104 | 15818 | 16043 | ||||
| WBsf520266 | 7580 | 7590 | ||||
| WBsf520367 | 19782 | 20428 | ||||
| WBsf520462 | 6526 | 7185 | ||||
| WBsf520567 | 6854 | 7183 | ||||
| WBsf520683 | 13143 | 13471 | ||||
| WBsf520810 | 13074 | 13542 | ||||
| WBsf520889 | 6822 | 7213 | ||||
| WBsf521273 | 13209 | 13433 | ||||
| WBsf521300 | 6914 | 7089 | ||||
| WBsf521707 | 13131 | 13559 | ||||
| WBsf522375 | 15672 | 16071 | ||||
| WBsf522448 | 18452 | 20754 | ||||
| WBsf522547 | 28590 | 28625 | ||||
| WBsf522895 | 13130 | 13438 | ||||
| WBsf523121 | 6895 | 7193 | ||||
| WBsf523882 | 13084 | 13513 | ||||
| WBsf523891 | 6815 | 7255 | ||||
| WBsf524636 | 8920 | 10719 | ||||
| WBsf524969 | 16009 | 16759 | ||||
| WBsf524983 | 18328 | 18666 | ||||
| WBsf525295 | 3284 | 3298 | ||||
| WBsf525369 | 3554 | 3871 | ||||
| WBsf525403 | 13032 | 13034 | ||||
| WBsf525475 | 13887 | 14078 | ||||
| WBsf525576 | 5588 | 6294 | ||||
| WBsf526457 | 15405 | 15480 | ||||
| WBsf526907 | 12830 | 13610 | ||||
| WBsf526916 | 18709 | 20502 | ||||
| WBsf527044 | 20954 | 21984 | ||||
| WBsf527197 | 6832 | 7332 | ||||
| WBsf527224 | 15363 | 15940 | ||||
| WBsf527234 | 22792 | 24289 | ||||
| WBsf527564 | 8696 | 9003 | ||||
| WBsf527915 | 10580 | 10868 | ||||
| WBsf528002 | 24579 | 24897 | ||||
| WBsf528072 | 716 | 2836 | ||||
| WBsf528781 | 22905 | 23309 | ||||
| WBsf528830 | 19929 | 20379 | ||||
| WBsf528834 | 18859 | 19180 | ||||
| WBsf529289 | 7020 | 7103 | ||||
| WBsf529431 | 19095 | 19121 | ||||
| WBsf529442 | 13235 | 13236 | ||||
| WBsf530710 | 23101 | 24208 | ||||
| WBsf530948 | 13107 | 13495 | ||||
| WBsf531175 | 952 | 1312 | ||||
| WBsf531958 | 13173 | 13547 | ||||
| WBsf532106 | 23366 | 23640 | ||||
| WBsf532482 | 24712 | 24987 | ||||
| WBsf532681 | 980 | 1208 | ||||
| WBsf533081 | 22354 | 22444 | ||||
| WBsf533249 | 23847 | 23991 | ||||
| WBsf533324 | 6916 | 7090 | ||||
| WBsf533559 | 12759 | 12765 | ||||
| WBsf533770 | 11539 | 11542 | ||||
| WBsf534900 | 13044 | 13605 | ||||
| WBsf535187 | 6855 | 7195 | ||||
| WBsf535751 | 13065 | 13987 | ||||
| WBsf535945 | 6846 | 7201 | ||||
| WBsf536470 | 13120 | 13577 | ||||
| WBsf536738 | 6891 | 7273 | ||||
| WBsf537103 | 13133 | 13448 | ||||
| WBsf537266 | 6762 | 7160 | ||||
| WBsf538082 | 13017 | 13635 | ||||
| WBsf538594 | 12985 | 13530 | ||||
| WBsf538661 | 6884 | 7231 | ||||
| WBsf539340 | 12954 | 13578 | ||||
| WBsf540586 | 3526 | 4142 | ||||
| WBsf540936 | 13194 | 13432 | ||||
| WBsf541002 | 22835 | 23302 | ||||
| WBsf541080 | 18286 | 18656 | ||||
| WBsf541089 | 9086 | 10623 | ||||
| WBsf541558 | 13144 | 13472 | ||||
| WBsf541887 | 6892 | 7105 | ||||
| WBsf542435 | 10588 | 10631 | ||||
| WBsf542992 | 13141 | 13573 | ||||
| WBsf543111 | 12901 | 13850 | ||||
| WBsf543154 | 12933 | 13698 | ||||
| WBsf544002 | 6921 | 7091 | ||||
| WBsf544274 | 24022 | 24173 | ||||
| WBsf544531 | 3668 | 3684 | ||||
| WBsf544672 | 13160 | 13433 | ||||
| WBsf545138 | 135 | 143 | ||||
| WBsf545437 | 13048 | 13497 | ||||
| WBsf545631 | 6860 | 7230 | ||||
| WBsf546089 | 37 | 79 | ||||
| WBsf546549 | 13259 | 13337 | ||||
| WBsf546862 | 13448 | 13474 | ||||
| WBsf547303 | 12961 | 13497 | ||||
| WBsf547406 | 6832 | 7283 | ||||
| WBsf548183 | 2261 | 2541 | ||||
| WBsf548898 | 207 | 439 | ||||
| WBsf549794 | 13199 | 13423 | ||||
| WBsf550110 | 13184 | 13491 | ||||
| WBsf550848 | 13236 | 13338 | ||||
| WBsf043627 | 1715 | 3090 | ||||
| WBsf043628 | 8853 | 10142 | ||||
| WBsf043629 | 14959 | 16678 | ||||
| WBsf898480 | 21107 | 21107 | ||||
| WBsf646927 | 147 | 286 | ||||
| WBsf646928 | 1114 | 1261 | ||||
| WBsf646929 | 7249 | 7278 | ||||
| WBsf646930 | 13343 | 13419 | ||||
| WBsf652765 | 6995 | 6952 | ||||
| WBsf652766 | 13228 | 13186 | ||||
| WBsf652767 | 22944 | 22921 | ||||
| WBsf652768 | 23157 | 23039 | ||||
| WBsf652769 | 23283 | 23273 | ||||
| WBsf652770 | 31197 | 31190 | ||||
| WBsf669112 | 10329 | 10329 | ||||
| WBsf669113 | 10562 | 10562 | ||||
| WBsf669114 | 22698 | 22672 | ||||
| WBsf686034 | 22763 | 22811 | ||||
| WBsf686035 | 23199 | 23249 | ||||
| WBsf686036 | 23360 | 23394 | ||||
| WBsf686037 | 23810 | 23810 | ||||
| WBsf686038 | 24139 | 24224 | ||||
| WBsf686039 | 24799 | 24799 | ||||
| WBsf686040 | 24989 | 25019 | ||||
| WBsf707972 | 183 | 33 | ||||
| WBsf707973 | 1089 | 958 | ||||
| WBsf707974 | 8234 | 8232 | ||||
| WBsf707975 | 14493 | 14477 | ||||
| WBsf707976 | 23715 | 23626 | ||||
| WBsf707977 | 24001 | 23867 | ||||
| WBsf707978 | 24108 | 24089 | ||||
| WBsf707979 | 24903 | 24893 | ||||
| WBsf263183 | 25125 | 25522 | ||||
| Feature_data | C05C8:Polysome | 1 | 32729 | |||
| C05C8:TranscriptionallyActiveRegion | 1 | 32729 | ||||
| C05C8:ChIPSeqTF | 1 | 32729 | ||||
| C05C8:TRF | 1 | 32729 | ||||
| C05C8:Dust | 1 | 32729 | ||||
| C05C8:inverted | 1 | 32729 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | C13A2 | 32530 | ||||
| Overlap_left | C13F10 | |||||
| Clone_left_end | C05C8 | 1497 | ||||
| Clone_right_end | C13F10 | 16867 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080353 | ||
| NDB_ID | _AF016430 | |||||
| NDB_SV | FO080353.2 | |||||
| Secondary_accession | AF016430 | |||||
| DB_remark | The 5' clone is C13F10, 1500 bp overlap; the 3' clone is C13A2, 200 bp overlap. Actual start of this clone is at base position 1497 of C05C8; actual end is at 11015 of C13A2. | |||||
| [121025] Sequence correction: SNP 0 bases @ 21107 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Sammons L | ||||
| Wohldmann P | ||||||
| From_laboratory | RW | |||||
| Date | 16 Aug 1996 00:00:00 | |||||
| Date_directory | 960813 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C05C8 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 3dfd94f0af5f2c84fe8713c0fded14cc | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 16 Aug 1996 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | 0.645866 | ||||
| Method | Genomic_canonical |
