| Bm6296a | Evidence | Curator_confirmed | WBPerson4025 |
|---|
| | | WBPerson4055 |
| SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 |
| Structure | Source_exons (13) |
| DB_info | DB_remark | BMA-UNC-3 protein; contains similarity to Pfam domains PF01833 (IPT/TIG domain), PF16422 (Transcription factor COE1 DNA-binding domain), PF16423 (Transcription factor COE1 helix-loop-helix domain); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR002909 (IPT domain), IPR038173 (Transcription factor COE, DNA-binding domain superfamily), IPR032200 (Transcription factor COE, DNA-binding domain), IPR013783 (Immunoglobulin-like fold), IPR032201 (Transcription factor COE, helix-loop-helix domain), IPR003523 (Transcription factor COE) |
| Origin | From_laboratory | HX |
| | Species | Brugia malayi |
| Properties | Coding | CDS |
| | | CDS_predicted_by | RATT |
| | | Prediction_status | Partially_confirmed |
| | Isoform | Curator_confirmed | WBPerson4055 |
| Visible | Gene | WBGene00226557 |
| | Corresponding_transcript | Bm6296a.1 |
| | Corresponding_protein | BM45717 |
| | Matching_cDNA | brugia_GG2313|c18_g1_i2 | Inferred_automatically | transcript_builder.pl |
| | RNASeq_FPKM | WBls:0000078 | 1.05631 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910 |
| | | | 1.49521 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909 |
| | | | 3.12312 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908 |
| | | | 5.51226 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874 |
| | | | 7e-06 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911 |
| | | | 6.78647 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875 |
| | | | 7.07294 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873 |
| | | WBls:0000080 | 2.12918 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949 |
| | | | 2.88635 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770 |
| | | | 3.55014 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947 |
| | | | 4.00847 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771 |
| | | WBls:0000081 (23) |
| | | WBls:0000082 | 0.170961 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871 |
| | | | 0.421338 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869 |
| | | | 1.77455 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033 |
| | | | 2.12935 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039 |
| | | | 2.90652 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041 |
| | | WBls:0000083 | 0.00014 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176949 |
| | | | 0.000178 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447467 |
| | | | 0.000179 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176960 |
| | | | 0.000193 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200127 |
| | | | 0.000404 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200119 |
| | | | 0.000413 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447444 |
| | | | 0.000459 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447442 |
| | | | 0.00046 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176954 |
| | | | 0.000584 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447452 |
| | | | 0.000595 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447447 |
| | | | 0.000611 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176950 |
| | | | 0.000636 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176963 |
| | | | 0.000664 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176961 |
| | | | 0.000686 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447448 |
| | | | 0.000712 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447463 |
| | | | 0.000726 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176970 |
| | | | 0.000729 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447445 |
| | | | 0.000825 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176951 |
| | | | 0.000931 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176962 |
| | | | 0.001273 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176947 |
| | | | 0.001638 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447460 |
| | | | 0.001718 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447466 |
| | | | 0.001738 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447471 |
| | | | 0.002096 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447456 |
| | | | 0.002161 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447469 |
| | | | 0.002182 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176959 |
| | | | 0.002212 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447459 |
| | | | 0.002287 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447470 |
| | | | 0.002457 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447462 |
| | | | 0.21346 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200130 |
| | | | 0.812383 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200126 |
| | | | 0 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200129 |
| | | | | | RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200120 |
| | | | 10.2651 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176964 |
| | | | 10.3285 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200117 |
| | | | 1.04882 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200125 |
| | | | 10.6218 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447464 |
| | | | 1.34863 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200128 |
| | | | 13.826 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176956 |
| | | | 14.6633 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026032 |
| | | | 1.6e-05 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447458 |
| | | | 18.8868 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026037 |
| | | | 1.9631 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447446 |
| | | | 2.05094 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.SRP068692.SRX1539737 |
| | | | 2.08802 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.SRP068692.SRX1539740 |
| | | | 2.11483 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447457 |
| | | | 2.19782 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP068692.SRX1539730 |
| | | | 2.28143 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447453 |
| | | | 2.46229 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539085 |
| | | | 2.56318 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176965 |
| | | | 2.76024 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539734 |
| | | | 2.9901 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176967 |
| | | | 3.01338 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176968 |
| | | | 3.18661 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200123 |
| | | | 3.38952 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP068692.SRX1539707 |
| | | | 3.64436 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447468 |
| | | | 3.90022 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.male.WBbt:0007833.SRP090644.SRX2200124 |
| | | | 4.22291 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176958 |
| | | | 4.93411 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447454 |
| | | | 5.17382 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176969 |
| | | | 5.62236 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Male.WBbt:0007833.ERP000948.ERX026029 |
| | | | 5.67844 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447461 |
| | | | 5.7577 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176957 |
| | | | 6.01823 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.female.WBbt:0007833.SRP090644.SRX2200118 |
| | | | 6.14615 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176952 |
| | | | 6.28218 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447450 |
| | | | 6.94121 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447465 |
| | | | 7.27945 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447472 |
| | | | 7.50451 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447449 |
| | | | 7.77657 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176966 |
| | | | 7.8405 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447443 |
| | | | 7.96428 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447451 |
| | | | 8.18795 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176953 |
| | | | 8.31383 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.ERP000948.ERX026036 |
| | | | 8.43613 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176948 |
| | | | 8.85199 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447455 |
| | | | 8.95842 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066611.SRX1447473 |
| | | | 9.28796 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP063061.SRX1176955 |
| | | | 9.73558 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447441 |
| | | | 9.93268 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000083.Female.WBbt:0007833.SRP066610.SRX1447440 |
| | | WBls:0000092 | 5.06933 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746 |
| | | | 5.49167 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751 |
| | | WBls:0000094 | 10.5374 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034 |
| | | | 4.62496 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035 |
| | | WBls:0000097 | 0.002995 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886 |
| | | | 0.262551 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769 |
| | | | 0 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876 |
| | | | 1.69595 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817 |
| | | | 2.09122 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171 |
| | | | 7.9e-05 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170 |
| | | WBls:0000662 | 16.8177 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031 |
| | | | 19.5632 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040 |
| | | WBls:0000663 | 27.1362 | From_analysis | RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038 |
| | Last_reviewed | 29 Jun 2018 10:56:18 | WBPerson4055 |
| | Remark | [131112 pad] Renamed from Bm6296a as this is a single Isoform locus. | Curator_confirmed | WBPerson1983 |
| | | [180629 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 |
| | | | From_analysis | RNASeq |
| Method | curated |
