WormBase Tree Display for CDS: B0546.4a
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| B0546.4a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | B0546 | |||
| Structure | Source_exons | 1 | 112 | |||
| 162 | 283 | |||||
| 327 | 457 | |||||
| 817 | 937 | |||||
| DB_info | Database | SwissProt | UniProtAcc | O44440 | ||
| UniProtIsoformAcc | O44440-1 | |||||
| UniProt | UniProtAcc | O44440 | ||||
| UniProt_GCRP | UniProtAcc | O44440 | ||||
| AlphaFold | entry | O44440 | ||||
| NCBI_protein | GI_number | GI:351018254 | ||||
| TREEFAM | TREEFAM_ID | TF323378 | ||||
| Protein_id | CHROMOSOME_IV | CCD62189 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03226 (Yippee zinc-binding/DNA-binding /Mis18, centromere assembly); contains similarity to Interpro domains IPR004910 (Yippee/Mis18/Cereblon), IPR039058 (Yippee family) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | AU209760 | |||
| Visible | Gene | WBGene00015251 | ||||
| Corresponding_transcript | B0546.4a.1 | |||||
| Corresponding_protein | CE16795 | |||||
| Corresponding_PCR_product | cenix:48-f7 | |||||
| mv_B0546.4 | ||||||
| sjj_B0546.4 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (33) | ||||||
| RNAi_result | WBRNAi00028202 | |||||
| WBRNAi00009849 | ||||||
| WBRNAi00039184 | ||||||
| Microarray_results (23) | ||||||
| Brief_identification | Protein yippee-like B0546.4 | Accession_evidence | UniProt | SP:O44440 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 26 Sep 2013 00:00:00 | WBPerson4025 | ||||
| Method | curated |
