WormBase Tree Display for Variation: WBVar02150415

WBVar02150415 Name: Public_name: tm12888
    Other_name: F14F3.1a.2:c.8-211_156-431del
      F14F3.1a.1:c.8-211_156-431del
    HGVSg: CHROMOSOME_X:g.10509242_10510546del
  Sequence_details: SMap: S_parent: Sequence: F14F3
    Flanking_sequences: agcagcagtacatagatgagtagaaataaa aatttttcttagttgtttagttttagaata
    Mapping_target: F14F3
    Source_location: 7 CHROMOSOME_X 10509241 10510547 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm12888_external
      tm12888_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 12888
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006870
    Transcript: F14F3.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F14F3.1a.1:c.8-211_156-431del
        Intron_number: 3-4/13
        Exon_number: 4/14
      F14F3.1a.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F14F3.1a.2:c.8-211_156-431del
        Intron_number: 2-3/12
        Exon_number: 3/13
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Remark: 13980/13981-15285/15286(1305 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele