WormBase Tree Display for Variation: WBVar02148568
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WBVar02148568 | Evidence | Paper_evidence | WBPaper00050770 | ||
---|---|---|---|---|---|
Name | Public_name | yd101 | |||
Other_name | K07E8.3.2:c.33_37del | ||||
K07E8.3.1:c.33_37del | |||||
CE29512:p.Thr12GlyfsTer6 | |||||
HGVSg | CHROMOSOME_II:g.658734_658738del | ||||
Sequence_details | SMap | S_parent | Sequence | K07E8 | |
Flanking_sequences | ggatgaagacttaacccctattccatcact | cggacattcagaaatttagaatatatggac | |||
Mapping_target | K07E8 | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Engineered_allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | HD | ||||
Production_method | CRISPR_Cas9 | ||||
Status | Live | ||||
Affects | Gene | WBGene00019495 | |||
Transcript | K07E8.3.1 | VEP_consequence | frameshift_variant | ||
VEP_impact | HIGH | ||||
HGVSc | K07E8.3.1:c.33_37del | ||||
HGVSp | CE29512:p.Thr12GlyfsTer6 | ||||
cDNA_position | 66-70 | ||||
CDS_position | 33-37 | ||||
Protein_position | 11-13 | ||||
Exon_number | 2/8 | ||||
Codon_change | ctCACTCcg/ctcg | ||||
Amino_acid_change | LTP/LX | ||||
K07E8.3.2 | VEP_consequence | frameshift_variant | |||
VEP_impact | HIGH | ||||
HGVSc | K07E8.3.2:c.33_37del | ||||
HGVSp | CE29512:p.Thr12GlyfsTer6 | ||||
cDNA_position | 66-70 | ||||
CDS_position | 33-37 | ||||
Protein_position | 11-13 | ||||
Exon_number | 2/8 | ||||
Codon_change | ctCACTCcg/ctcg | ||||
Amino_acid_change | LTP/LX | ||||
Reference | WBPaper00050770 | ||||
Method | Engineered_allele |