WormBase Tree Display for Gene: WBGene00019495
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| WBGene00019495 | SMap | S_parent | Sequence | K07E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sdz-24 | Paper_evidence | WBPaper00024645 | |||||
| Person_evidence | WBPerson374 | ||||||||
| Sequence_name | K07E8.3 | ||||||||
| Molecular_name | K07E8.3 | ||||||||
| K07E8.3.1 | |||||||||
| CE29512 | |||||||||
| K07E8.3.2 | |||||||||
| Other_name | CELE_K07E8.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sdz-24 | ||||||||
| DB_info | Database | AceView | gene | 2A949 | |||||
| WormQTL | gene | WBGene00019495 | |||||||
| WormFlux | gene | WBGene00019495 | |||||||
| NDB | locus_tag | CELE_K07E8.3 | |||||||
| NCBI | gene | 173457 | |||||||
| RefSeq | protein | NM_061380.8 | |||||||
| TREEFAM | TREEFAM_ID | TF322994 | |||||||
| TrEMBL | UniProtAcc | O16689 | |||||||
| UniProt_GCRP | UniProtAcc | O16689 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Aug 2005 17:08:06 | WBPerson2970 | Name_change | CGC_name | sdz-24 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sdz | ||||||||
| Allele (82) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g3156 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; neurons; rectal epithelial cell; and rectum based on tiling array; proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; 4-bromodiphenyl ether; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Nucleic acid-binding, OB-fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K07E8.3 | |||||||
| Corresponding_transcript | K07E8.3.1 | ||||||||
| K07E8.3.2 | |||||||||
| Associated_feature | WBsf220781 | ||||||||
| WBsf220782 | |||||||||
| WBsf220783 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr16269 | ||||||||
| Expr1016296 | |||||||||
| Expr1153870 | |||||||||
| Expr2015682 | |||||||||
| Expr2033915 | |||||||||
| Drives_construct | WBCnstr00025797 | ||||||||
| WBCnstr00042870 | |||||||||
| Construct_product | WBCnstr00025797 | ||||||||
| WBCnstr00042870 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (321) | |||||||||
| Interaction (116) | |||||||||
| Map_info | Map | II | Position | -15.5928 | Error | 0.000122 | |||
| Positive | Positive_clone | K07E8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00050770 | ||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
