WormBase Tree Display for Variation: WBVar02146950

WBVar02146950 Name: Public_name: tm4433
    Other_name: VF13D12L.1.1:c.-15_317+6delinsTATATA
      C47D12.8.2:c.1558-659_1558-322delinsTATATA
      C47D12.8.1:c.1558-659_1558-322delinsTATATA
    HGVSg: CHROMOSOME_II:g.11699940_11700277delinsTATATA
  Sequence_details: SMap: S_parent: Sequence: VF13D12L
    Flanking_sequences: taagcctaagactataaaaatcgataaacc ggggagcagagtccttttattacctgcaaa
    Mapping_target: VF13D12L
    Source_location: 7 CHROMOSOME_II 11699939 11700278 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TATATA
      Deletion
    PCR_product: tm4433_external
      tm4433_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 4433
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00012148
      WBGene00008140
    Transcript: VF13D12L.1.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: VF13D12L.1.1:c.-15_317+6delinsTATATA
        cDNA_position: 24-?
        Intron_number: 2/4
        Exon_number: 1-2/5
      C47D12.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47D12.8.1:c.1558-659_1558-322delinsTATATA
        Intron_number: 3/12
      C47D12.8.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47D12.8.2:c.1558-659_1558-322delinsTATATA
        Intron_number: 3/12
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Remark: 862/863-TATATA-1200/1201 (338 bp deletion + 6 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele