WormBase Tree Display for Variation: WBVar02146572
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WBVar02146572 | Evidence | Paper_evidence | WBPaper00044733 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | lax209 | |||||
Other_name | F56D12.1c.1:c.679-1G>A | ||||||
F56D12.1a.2:c.679-1G>A | |||||||
F56D12.1a.1:c.679-1G>A | |||||||
F56D12.1d.1:c.259-1G>A | |||||||
F56D12.1b.1:c.679-1G>A | |||||||
HGVSg | CHROMOSOME_II:g.1308016C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | |||
Flanking_sequences | aaaaaaatcatttttatcccaattttttca | ggtaacgtctccctctggaagccatcgaac | |||||
Mapping_target | F56D12 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00044733 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | SPC | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000112 | |||||
Transcript | F56D12.1b.1 | VEP_consequence | splice_acceptor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | F56D12.1b.1:c.679-1G>A | ||||||
Intron_number | 5/7 | ||||||
F56D12.1a.2 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | F56D12.1a.2:c.679-1G>A | ||||||
Intron_number | 6/9 | ||||||
F56D12.1a.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | F56D12.1a.1:c.679-1G>A | ||||||
Intron_number | 5/8 | ||||||
F56D12.1d.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | F56D12.1d.1:c.259-1G>A | ||||||
Intron_number | 1/3 | ||||||
F56D12.1c.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | F56D12.1c.1:c.679-1G>A | ||||||
Intron_number | 4/5 | ||||||
Genetics | Interpolated_map_position | II | -15.5081 | ||||
Reference | WBPaper00044733 | ||||||
Method | Substitution_allele |