WormBase Tree Display for Variation: WBVar02144263

WBVar02144263 Name: Public_name: tm7221
    HGVSg: CHROMOSOME_V:g.11448331_11449870del
  Sequence_details: SMap: S_parent: Sequence: F57B7
    Flanking_sequences: ttgattattcaattaattgtagatttgatc aaggccttgatctcctggtgctccaggtgg
    Mapping_target: F57B7
    Source_location: 7 CHROMOSOME_V 11448330 11449871 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm7221_external
      tm7221_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 7221
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003248
      WBGene00000729
    Transcript: F57B7.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 779-?
        CDS_position: 779-?
        Protein_position: 260-?
        Intron_number: 6-8/9
        Exon_number: 6-10/10
      F57B7.3.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 335-?
        CDS_position: 319-?
        Protein_position: 107-?
        Exon_number: 3-4/4
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Remark: 13760/13761-15300/15301 (1540 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele