WormBase Tree Display for Variation: WBVar02144190

WBVar02144190 Name: Public_name: tm7112
    HGVSg: CHROMOSOME_III:g.13430455_13431155del
  Sequence_details: SMap: S_parent: Sequence: F45G2
    Flanking_sequences: tggaaatctctatagcaatttctgaattcc tttgagtcttcgggttgtccctgggacgga
    Mapping_target: F45G2
    Source_location: 7 CHROMOSOME_III 13430454 13431156 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm7112_external
      tm7112_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 7112
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006612
    Transcript: F45G2.6.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-383
        CDS_position: ?-243
        Protein_position: ?-81
        Intron_number: 2-3/13
        Exon_number: 1-4/14
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 23913/23914-24614/24615 (701 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele