WormBase Tree Display for Variation: WBVar02139237

WBVar02139237 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h16187
    Other_name: ZC8.4f.1:c.-21-601G>A
      ZC8.4e.1:c.197-1105G>A
      ZC8.4a.2:c.-21-601G>A
      ZC8.6.1:c.565-3368C>T
      ZC8.4a.1:c.-21-601G>A
    HGVSg: CHROMOSOME_X:g.4982962G>A
  Sequence_details: SMap: S_parent: Sequence: ZC8
    Flanking_sequences: TCAAAAATTGGATGGGAGGGGGGGCGAACAAATGAAACAT CAAACAAAATACGTGTTTACAAGACCTCCGACCTACCGAA
    Mapping_target: CHROMOSOME_X
    Source_location: 200 CHROMOSOME_X 4982931 4982931
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023750
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00022500
      WBGene00022501
    Transcript: ZC8.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZC8.4a.2:c.-21-601G>A
        Intron_number: 1/20
      ZC8.6.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZC8.6.1:c.565-3368C>T
        Intron_number: 6/15
      ZC8.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZC8.4f.1:c.-21-601G>A
        Intron_number: 1/20
      ZC8.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZC8.4e.1:c.197-1105G>A
        Intron_number: 1/18
      ZC8.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZC8.4a.1:c.-21-601G>A
        Intron_number: 2/21
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose