WormBase Tree Display for Variation: WBVar02134761

WBVar02134761 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h8683
    Other_name: CE27559:p.Gln586Ter
      ZK822.3a.1:c.1756C>T
      CE28196:p.Gln546Ter
      ZK822.3c.1:c.1636C>T
      CE27560:p.Gln606Ter
      ZK822.3b.1:c.1816C>T
    HGVSg: CHROMOSOME_IV:g.11935100C>T
  Sequence_details: SMap: S_parent: Sequence: ZK822
    Flanking_sequences: GCTTGATAGAAAGTTACACGAAATGAATAGACCATCAGTT AAATTACGGACGTTGATGGACAGGATGATATTCAAGACGA
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 11935069 11935069
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023676
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00003736
    Transcript: ZK822.3b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK822.3b.1:c.1816C>T
        HGVSp: CE27560:p.Gln606Ter
        cDNA_position: 1819
        CDS_position: 1816
        Protein_position: 606
        Exon_number: 9/11
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
      ZK822.3c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK822.3c.1:c.1636C>T
        HGVSp: CE28196:p.Gln546Ter
        cDNA_position: 1735
        CDS_position: 1636
        Protein_position: 546
        Exon_number: 8/10
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
      ZK822.3a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK822.3a.1:c.1756C>T
        HGVSp: CE27559:p.Gln586Ter
        cDNA_position: 2141
        CDS_position: 1756
        Protein_position: 586
        Exon_number: 9/11
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose