WormBase Tree Display for Variation: WBVar02133169
expand all nodes | collapse all nodes | view schema
| WBVar02133169 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h12127 | ||||
| Other_name | F18F11.3e.1:c.1580-33C>T | |||||
| F18F11.3d.1:c.1580-33C>T | ||||||
| F18F11.3b.1:c.1580-33C>T | ||||||
| F18F11.3f.1:c.1580-33C>T | ||||||
| F18F11.3h.1:c.1580-33C>T | ||||||
| F18F11.3a.1:c.1580-33C>T | ||||||
| F18F11.3c.1:c.1580-33C>T | ||||||
| F18F11.3g.1:c.1580-33C>T | ||||||
| HGVSg | CHROMOSOME_IV:g.351558C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | Y66H1B | ||
| Flanking_sequences | GCGCGTGTGAACGGCTGGTATTTGTATAAATAATTATTTG | ATGTTATAAATTCAAATTCTTAATTTTTAAAGGGTCATCT | ||||
| Mapping_target | CHROMOSOME_IV | |||||
| Source_location | 200 | CHROMOSOME_IV | 351558 | 351558 | ||
| Type_of_mutation | Substitution | C | T | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023761 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00017576 | ||||
| Transcript | F18F11.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3e.1:c.1580-33C>T | |||||
| Intron_number | 11/25 | |||||
| F18F11.3g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3g.1:c.1580-33C>T | |||||
| Intron_number | 11/25 | |||||
| F18F11.3f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3f.1:c.1580-33C>T | |||||
| Intron_number | 11/24 | |||||
| F18F11.3h.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3h.1:c.1580-33C>T | |||||
| Intron_number | 11/26 | |||||
| F18F11.3d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3d.1:c.1580-33C>T | |||||
| Intron_number | 11/25 | |||||
| F18F11.3a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3a.1:c.1580-33C>T | |||||
| Intron_number | 11/25 | |||||
| F18F11.3b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3b.1:c.1580-33C>T | |||||
| Intron_number | 11/23 | |||||
| F18F11.3c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F18F11.3c.1:c.1580-33C>T | |||||
| Intron_number | 11/24 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
