WormBase Tree Display for Variation: WBVar02131874

WBVar02131874 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h6165
    Other_name: B0285.1c.2:c.393-232C>T
      B0285.1a.2:c.393-232C>T
      B0285.1a.1:c.393-232C>T
      B0285.1b.1:c.393-232C>T
      B0285.1c.1:c.393-232C>T
      B0285.1b.2:c.393-232C>T
    HGVSg: CHROMOSOME_III:g.4335995C>T
  Sequence_details: SMap: S_parent: Sequence: B0285
    Flanking_sequences: TGTCCATTCTTCTTTCGATCTCTCCTGTCAACGGGTGCCC CTCCGCGACACTCAAATTTCCGTTACCGTCGCGACAATTT
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 4335967 4335967
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023699
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00007135
    Transcript: B0285.1c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0285.1c.2:c.393-232C>T
        Intron_number: 3/14
      B0285.1b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0285.1b.2:c.393-232C>T
        Intron_number: 3/14
      B0285.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0285.1c.1:c.393-232C>T
        Intron_number: 5/16
      B0285.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0285.1a.2:c.393-232C>T
        Intron_number: 3/14
      B0285.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0285.1b.1:c.393-232C>T
        Intron_number: 5/16
      B0285.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: B0285.1a.1:c.393-232C>T
        Intron_number: 5/16
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose