WormBase Tree Display for Variation: WBVar02131803
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| WBVar02131803 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h15430 | ||||
| Other_name | F13B10.1e.2:c.1158+4099C>T | |||||
| F13B10.1d.1:c.-208+4099C>T | ||||||
| F13B10.1c.1:c.1707+4099C>T | ||||||
| F13B10.1e.3:c.1158+4099C>T | ||||||
| F13B10.1d.2:c.-208+4099C>T | ||||||
| F13B10.1a.1:c.1545+4099C>T | ||||||
| F13B10.1f.1:c.1707+4099C>T | ||||||
| F13B10.1e.1:c.1158+4099C>T | ||||||
| F13B10.1g.1:c.1545+4099C>T | ||||||
| F13B10.1a.2:c.1545+4099C>T | ||||||
| HGVSg | CHROMOSOME_III:g.3876017G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | F13B10 | ||
| Flanking_sequences | TCTCTGATCTTCTTTTGTATAATGCAACAGGTGGCAATAG | TGGTACAATTGTTCATTCAAATTTGCGGTATTCAGGTCCG | ||||
| Mapping_target | CHROMOSOME_III | |||||
| Source_location | 200 | CHROMOSOME_III | 3875995 | 3875995 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023766 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00006575 | ||||
| Transcript | F13B10.1d.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1d.2:c.-208+4099C>T | |||||
| Intron_number | 7/11 | |||||
| F13B10.1e.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1e.2:c.1158+4099C>T | |||||
| Intron_number | 8/11 | |||||
| F13B10.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1d.1:c.-208+4099C>T | |||||
| Intron_number | 9/13 | |||||
| F13B10.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1e.1:c.1158+4099C>T | |||||
| Intron_number | 8/11 | |||||
| F13B10.1c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1c.1:c.1707+4099C>T | |||||
| Intron_number | 8/11 | |||||
| F13B10.1a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1a.2:c.1545+4099C>T | |||||
| Intron_number | 9/12 | |||||
| F13B10.1f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1f.1:c.1707+4099C>T | |||||
| Intron_number | 7/9 | |||||
| F13B10.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1a.1:c.1545+4099C>T | |||||
| Intron_number | 10/13 | |||||
| F13B10.1g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1g.1:c.1545+4099C>T | |||||
| Intron_number | 7/9 | |||||
| F13B10.1e.3 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13B10.1e.3:c.1158+4099C>T | |||||
| Intron_number | 6/9 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
