WormBase Tree Display for Variation: WBVar02129326

WBVar02129326 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h16636
    Other_name: F56D12.1b.1:c.678+335C>T
      F56D12.1d.1:c.258+335C>T
      F56D12.1a.1:c.678+335C>T
      F56D12.1c.1:c.678+335C>T
      F56D12.1a.2:c.678+335C>T
    HGVSg: CHROMOSOME_II:g.1308410G>A
  Sequence_details: SMap: S_parent: Sequence: F56D12
    Flanking_sequences: CAGACCAAATTTATTTAAAACTACTTGGGTCTGCTAAATT AAAATTGTAGTTTGTAGTCTAGCAGACCCATAGAATTGGG
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 1308416 1308416
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023759
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00000112
    Transcript: F56D12.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56D12.1b.1:c.678+335C>T
        Intron_number: 5/7
      F56D12.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56D12.1a.2:c.678+335C>T
        Intron_number: 6/9
      F56D12.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56D12.1a.1:c.678+335C>T
        Intron_number: 5/8
      F56D12.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56D12.1d.1:c.258+335C>T
        Intron_number: 1/3
      F56D12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F56D12.1c.1:c.678+335C>T
        Intron_number: 4/5
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose