WormBase Tree Display for Variation: WBVar02127083

WBVar02127083 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h4580
    Other_name: CE18135:p.Tyr116Ter
      R12E2.3.1:c.348C>G
    HGVSg: CHROMOSOME_I:g.4175767C>G
  Sequence_details: SMap: S_parent: Sequence: R12E2
    Flanking_sequences: TCGACATGGACTATTTGGAGAGCATGTATGGAATGTTCTA AAGGTTGGTGAATTTTGAAATCTCGTTTTTATTTAATTTT
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 4175768 4175768
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023661
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00004464
    Transcript: R12E2.3.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: R12E2.3.1:c.348C>G
        HGVSp: CE18135:p.Tyr116Ter
        cDNA_position: 352
        CDS_position: 348
        Protein_position: 116
        Exon_number: 4/9
        Codon_change: taC/taG
        Amino_acid_change: Y/*
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose