WormBase Tree Display for Variation: WBVar02126040

WBVar02126040 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12306
    Other_name: CE33169:p.Pro39Ser
      T06A4.1b.1:c.115C>T
      T06A4.1a.1:c.-426C>T
    HGVSg: CHROMOSOME_I:g.771473C>T
  Sequence_details: SMap: S_parent: Sequence: T06A4
    Flanking_sequences: TAACCAAAAAACTTCCAGCTTCAAACTAATCCGAATCAAT CGGAAACTGAAGGAAGTGTGAAATATCTTCGAAGTCTGTA
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 771475 771475
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023780
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00020281
    Transcript: T06A4.1b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: T06A4.1b.1:c.115C>T
        HGVSp: CE33169:p.Pro39Ser
        cDNA_position: 190
        CDS_position: 115
        Protein_position: 39
        Exon_number: 3/11
        Codon_change: Ccg/Tcg
        Amino_acid_change: P/S
      T06A4.1a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: T06A4.1a.1:c.-426C>T
        cDNA_position: 163
        Exon_number: 2/12
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose