WormBase Tree Display for Variation: WBVar02125760
expand all nodes | collapse all nodes | view schema
WBVar02125760 | Evidence | Paper_evidence | WBPaper00045184 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | bp399 | |||||
Other_name | CE22117:p.Gly15Arg | ||||||
Y48B6A.2.1:c.43G>A | |||||||
HGVSg | CHROMOSOME_II:g.14155336G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y48B6A | |||
Flanking_sequences | actaagaaggtcggaatcgtcggaaagtac | gaacccgttatggtgcttccctccgtaaga | |||||
Mapping_target | Y48B6A | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00045184 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00008594 | ||||||
Laboratory | HZ | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00004456 | |||||
Transcript | Y48B6A.2.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0.02 | deleterious_low_confidence | |||||
PolyPhen | 0.992 | probably_damaging | |||||
HGVSc | Y48B6A.2.1:c.43G>A | ||||||
HGVSp | CE22117:p.Gly15Arg | ||||||
cDNA_position | 43 | ||||||
CDS_position | 43 | ||||||
Protein_position | 15 | ||||||
Exon_number | 1/1 | ||||||
Codon_change | Gga/Aga | ||||||
Amino_acid_change | G/R | ||||||
Interactor | WBInteraction000521810 | ||||||
Genetics | Interpolated_map_position | II | 22.4552 | ||||
Reference | WBPaper00045184 | ||||||
Method | Substitution_allele |