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WormBase Tree Display for Variation: WBVar02120983

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Name Class

WBVar02120983NamePublic_nameWBVar02120983
Other_namecewivar00851906
CE32934:p.Ser289Ter
T12B5.8.2:c.865_866insAAGTGGTG
T12B5.8.1:c.865_866insAAGTGGTG
HGVSgCHROMOSOME_III:g.940964_940965insCACCACTT
Sequence_detailsSMapS_parentSequenceT12B5
Flanking_sequencesAGCGAAATATCGAATTTGTCGTTACCATTCGAATATTCGATATTAAATACGTTTTCGCCA
Mapping_targetT12B5
Source_location225CHROMOSOME_III940953944946From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionCACCACTT
Tandem_duplication
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00020456
WBGene00023345
WBGene00020455
TranscriptT12B5.8.2VEP_consequencestop_gained,frameshift_variant
VEP_impactHIGH
HGVScT12B5.8.2:c.865_866insAAGTGGTG
HGVSpCE32934:p.Ser289Ter
cDNA_position883-884
CDS_position865-866
Protein_position289
Exon_number4/7
Codon_changetcg/tAAGTGGTGcg
Amino_acid_changeS/*VVX
T12B5.10.1
T12B5.8.1VEP_consequencestop_gained,frameshift_variant
VEP_impactHIGH
HGVScT12B5.8.1:c.865_866insAAGTGGTG
HGVSpCE32934:p.Ser289Ter
cDNA_position883-884
CDS_position865-866
Protein_position289
Exon_number4/6
Codon_changetcg/tAAGTGGTGcg
Amino_acid_changeS/*VVX
PseudogeneT12B5.9
RemarkThis allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte