WormBase Tree Display for Variation: WBVar02120981
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WBVar02120981 | Name | Public_name | WBVar02120981 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00851904 | |||||||
T12B5.8.2:c.*3-54_*3-53insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC | ||||||||
T12B5.8.1:c.*468_*469insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC | ||||||||
HGVSg | CHROMOSOME_III:g.940410_940411insGTTAACGAGGAAAAAAATTAAAAATGAAATGA | |||||||
Sequence_details | SMap | S_parent | Sequence | T12B5 | ||||
Flanking_sequences | CTAACGAGGATAAGTATTAAAAATAAAATG | AAACCAATTCTGGGAATCGAACATACAGAG | ||||||
Mapping_target | T12B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 940399 | 944395 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GTTAACGAGGAAAAAAATTAAAAATGAAATGA | ||||||
Tandem_duplication | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00023345 | ||||||
WBGene00020455 | ||||||||
Transcript | T12B5.8.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T12B5.8.2:c.*3-54_*3-53insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC | |||||||
Intron_number | 5/6 | |||||||
T12B5.8.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T12B5.8.1:c.*468_*469insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC | |||||||
cDNA_position | 1437-1438 | |||||||
Exon_number | 5/6 | |||||||
Pseudogene | T12B5.9 | |||||||
Remark | This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous | |||||||
Method | WGS_Flibotte |