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WormBase Tree Display for Variation: WBVar02120981

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Name Class

WBVar02120981NamePublic_nameWBVar02120981
Other_namecewivar00851904
T12B5.8.2:c.*3-54_*3-53insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC
T12B5.8.1:c.*468_*469insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC
HGVSgCHROMOSOME_III:g.940410_940411insGTTAACGAGGAAAAAAATTAAAAATGAAATGA
Sequence_detailsSMapS_parentSequenceT12B5
Flanking_sequencesCTAACGAGGATAAGTATTAAAAATAAAATGAAACCAATTCTGGGAATCGAACATACAGAG
Mapping_targetT12B5
Source_location225CHROMOSOME_III940399944395From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionGTTAACGAGGAAAAAAATTAAAAATGAAATGA
Tandem_duplication
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00023345
WBGene00020455
TranscriptT12B5.8.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT12B5.8.2:c.*3-54_*3-53insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC
Intron_number5/6
T12B5.8.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScT12B5.8.1:c.*468_*469insTCATTTCATTTTTAATTTTTTTCCTCGTTAAC
cDNA_position1437-1438
Exon_number5/6
PseudogeneT12B5.9
RemarkThis allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte