WormBase Tree Display for Variation: WBVar02116356
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WBVar02116356 | Name | Public_name | WBVar02116356 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00847123 | |||||||
F39C12.2d.1:c.1977+124_1977+135delinsCAAATTAGAAGT | ||||||||
F39C12.2a.1:c.1994-407_1994-396delinsCAAATTAGAAGT | ||||||||
F39C12.2c.1:c.2037+124_2037+135delinsCAAATTAGAAGT | ||||||||
F39C12.2b.1:c.2127+124_2127+135delinsCAAATTAGAAGT | ||||||||
HGVSg | CHROMOSOME_X:g.4854695_4854706delinsACTTCTAATTTG | |||||||
Sequence_details | SMap | S_parent | Sequence | F39C12 | ||||
Flanking_sequences | TTCAGAAATTGTTAAAATATCAAAAAAAAA | AAAAAAACATTATTAAAAATTTAATATATT | ||||||
Mapping_target | F39C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 4854665 | 4854676 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ACTTCTAATTTG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000072 | ||||||
Transcript | F39C12.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2b.1:c.2127+124_2127+135delinsCAAATTAGAAGT | |||||||
Intron_number | 18/19 | |||||||
F39C12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2a.1:c.1994-407_1994-396delinsCAAATTAGAAGT | |||||||
Intron_number | 15/16 | |||||||
F39C12.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2c.1:c.2037+124_2037+135delinsCAAATTAGAAGT | |||||||
Intron_number | 17/18 | |||||||
F39C12.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2d.1:c.1977+124_1977+135delinsCAAATTAGAAGT | |||||||
Intron_number | 15/16 | |||||||
Method | WGS_Flibotte |