WormBase Tree Display for Variation: WBVar02113330
expand all nodes | collapse all nodes | view schema
WBVar02113330 | Name | Public_name | WBVar02113330 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00843989 | |||||||
Y71H2AM.12.1:c.532+119_532+125delinsCGCCCAA | ||||||||
Y71H2AM.5.2:c.-5+32608_-5+32614delinsTTGGGCG | ||||||||
HGVSg | CHROMOSOME_III:g.2732292_2732298delinsTTGGGCG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71H2AM | ||||
Flanking_sequences | GTTAACAACGTGCTGACGTCACTTTTTTTT | AAAAAAAACCCGCATTTTTTGTAGATCAAA | ||||||
Mapping_target | Y71H2AM | |||||||
Source_location | 225 | CHROMOSOME_III | 2732284 | 2732290 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTGGGCG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022177 | ||||||
WBGene00022170 | ||||||||
Transcript | Y71H2AM.5.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71H2AM.5.2:c.-5+32608_-5+32614delinsTTGGGCG | |||||||
Intron_number | 1/5 | |||||||
Y71H2AM.12.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71H2AM.12.1:c.532+119_532+125delinsCGCCCAA | |||||||
Intron_number | 6/7 | |||||||
Method | WGS_Flibotte |