WormBase Tree Display for Variation: WBVar02111225
expand all nodes | collapse all nodes | view schema
WBVar02111225 | Name | Public_name | WBVar02111225 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00841796 | |||||||
F42G2.4.1:c.666_688delinsAAATGATATAAAGAAACTTATCA | ||||||||
CE53955:p.Asp223_Glu230delinsAsnAspIleLysLysLeuIleLys | ||||||||
HGVSg | CHROMOSOME_II:g.2411705_2411727delinsTGATAAGTTTCTTTATATCATTT | |||||||
Sequence_details | SMap | S_parent | Sequence | F42G2 | ||||
Flanking_sequences | GTTAAAACAGGAGTTATACAAAGCTCACCT | GCTGATATTTTCCAAACTTCTACGTACGCA | ||||||
Mapping_target | F42G2 | |||||||
Source_location | 225 | CHROMOSOME_II | 2411710 | 2411732 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGATAAGTTTCTTTATATCATTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018353 | ||||||
Transcript | F42G2.4.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F42G2.4.1:c.666_688delinsAAATGATATAAAGAAACTTATCA | |||||||
HGVSp | CE53955:p.Asp223_Glu230delinsAsnAspIleLysLysLeuIleLys | |||||||
cDNA_position | 674-697 | |||||||
CDS_position | 666-689 | |||||||
Protein_position | 222-230 | |||||||
Exon_number | 3/8 | |||||||
Codon_change | gcTGATGATATACATAAACTTATTGAg/gcAAATGATATAAAGAAACTTATCAAg | |||||||
Amino_acid_change | ADDIHKLIE/ANDIKKLIK | |||||||
Method | WGS_Flibotte |