WormBase Tree Display for Variation: WBVar02110394
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WBVar02110394 | Name | Public_name | WBVar02110394 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00840939 | |||||||
Y105C5A.15e.1:c.534+95_534+125delinsTGAAACTGCTG | ||||||||
Y105C5A.15a.1:c.252+95_252+125delinsTGAAACTGCTG | ||||||||
Y105C5A.15b.1:c.252+95_252+125delinsTGAAACTGCTG | ||||||||
Y105C5A.15c.1:c.534+95_534+125delinsTGAAACTGCTG | ||||||||
HGVSg | CHROMOSOME_IV:g.15713138_15713168delinsTGAAACTGCTG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y105C5A | ||||
Flanking_sequences | AATAATAGTTACATTTATTGGGAAAATTTT | AAAAATGTTTCACAATTTTAATAAACTCTC | ||||||
Mapping_target | Y105C5A | |||||||
Source_location | 225 | CHROMOSOME_IV | 15713106 | 15713136 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGAAACTGCTG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00048132 | ||||||
WBGene00013639 | ||||||||
Transcript | Y105C5A.15c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.15c.1:c.534+95_534+125delinsTGAAACTGCTG | |||||||
Intron_number | 4/10 | |||||||
Y105C5A.15a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.15a.1:c.252+95_252+125delinsTGAAACTGCTG | |||||||
Intron_number | 6/13 | |||||||
Y105C5A.15e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.15e.1:c.534+95_534+125delinsTGAAACTGCTG | |||||||
Intron_number | 4/10 | |||||||
Y105C5A.266 | ||||||||
Y105C5A.15b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.15b.1:c.252+95_252+125delinsTGAAACTGCTG | |||||||
Intron_number | 2/8 | |||||||
Method | WGS_Flibotte |