WormBase Tree Display for Variation: WBVar02109938
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WBVar02109938 | Name | Public_name | WBVar02109938 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00840469 | |||||||
CE30712:p.Gln340_Leu341delinsProPhe | ||||||||
Y54G11A.14a.1:c.1008_1026delinsGTTCAAAAATCCTTTCCCG | ||||||||
HGVSg | CHROMOSOME_II:g.14319794_14319812delinsGTTCAAAAATCCTTTCCCG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G11A | ||||
Flanking_sequences | TCTTGAATCGGCCGAGTATCACTCAATGCC | CACTTCCTGGTGATCTTCGTGGTTGGAAGC | ||||||
Mapping_target | Y54G11A | |||||||
Source_location | 225 | CHROMOSOME_II | 14319718 | 14319736 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GTTCAAAAATCCTTTCCCG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013221 | ||||||
Transcript | Y54G11A.14a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54G11A.14a.1:c.1008_1026delinsGTTCAAAAATCCTTTCCCG | |||||||
HGVSp | CE30712:p.Gln340_Leu341delinsProPhe | |||||||
cDNA_position | 1007-1026 | |||||||
CDS_position | 1007-1026 | |||||||
Protein_position | 336-342 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | cCATTCAAGAATCAACTCCCT/cCGTTCAAAAATCCTTTCCCG | |||||||
Amino_acid_change | PFKNQLP/PFKNPFP | |||||||
Method | WGS_Flibotte |