WormBase Tree Display for Variation: WBVar02105798
expand all nodes | collapse all nodes | view schema
WBVar02105798 | Name | Public_name | WBVar02105798 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00836186 | |||||||
Y38H6C.22.1:c.246_255delinsGGGAGAGAAT | ||||||||
CE19116:p.Gly84Glu | ||||||||
HGVSg | CHROMOSOME_V:g.20558062_20558071delinsATTCTCTCCC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y38H6C | ||||
Flanking_sequences | ATTCATTTGAGCTTGTTGCTGGTAATCGTT | GGATAAACTGCATTACCACTGTTGTCTCTA | ||||||
Mapping_target | Y38H6C | |||||||
Source_location | 225 | CHROMOSOME_V | 20558031 | 20558040 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ATTCTCTCCC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000015 | ||||||
Transcript | Y38H6C.22.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y38H6C.22.1:c.246_255delinsGGGAGAGAAT | |||||||
HGVSp | CE19116:p.Gly84Glu | |||||||
cDNA_position | 246-256 | |||||||
CDS_position | 246-256 | |||||||
Protein_position | 82-86 | |||||||
Exon_number | 2/3 | |||||||
Codon_change | ccAGGAGGGAACAac/ccGGGAGAGAATAac | |||||||
Amino_acid_change | PGGNN/PGENN | |||||||
Method | WGS_Flibotte |