WormBase Tree Display for Variation: WBVar02101075
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WBVar02101075 | Name | Public_name | WBVar02101075 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00831316 | |||||||
CE19610:p.SerCysArgAlaAsnThrIlePhe368= | ||||||||
W05G11.6.1:c.1104_1122delinsATGCCGTGCTAACACGATC | ||||||||
HGVSg | CHROMOSOME_III:g.63958_63976delinsGATCGTGTTAGCACGGCAT | |||||||
Sequence_details | SMap | S_parent | Sequence | W05G11 | ||||
Flanking_sequences | TCCGTCGGCGGTCTCGGCGACGTTTGTGAA | GACTCCATGGCCATGGCGTTTGTCTTATGA | ||||||
Mapping_target | W05G11 | |||||||
Source_location | 225 | CHROMOSOME_III | 63957 | 63975 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GATCGTGTTAGCACGGCAT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021043 | ||||||
Transcript | W05G11.6.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | W05G11.6.1:c.1104_1122delinsATGCCGTGCTAACACGATC | |||||||
HGVSp | CE19610:p.SerCysArgAlaAsnThrIlePhe368= | |||||||
cDNA_position | 1108-1127 | |||||||
CDS_position | 1104-1123 | |||||||
Protein_position | 368-375 | |||||||
Exon_number | 5/7 | |||||||
Codon_change | tcGTGCCGCGCTAACACAATTTtc/tcATGCCGTGCTAACACGATCTtc | |||||||
Amino_acid_change | SCRANTIF | |||||||
Method | WGS_Flibotte |