WormBase Tree Display for Variation: WBVar02098178
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| WBVar02098178 | Name | Public_name | WBVar02098178 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00828306 | |||||||
| CE50538:p.Glu789_Ile793delinsAspGluTyrAsnVal | ||||||||
| C49C3.4b.1:c.2553_2566delinsGGATGAATATAATG | ||||||||
| CE19743:p.Glu1436_Ile1440delinsAspGluTyrAsnVal | ||||||||
| C49C3.4a.1:c.4305_4318delinsGGATGAATATAATG | ||||||||
| C49C3.4c.1:c.2364_2377delinsGGATGAATATAATG | ||||||||
| CE48513:p.Glu852_Ile856delinsAspGluTyrAsnVal | ||||||||
| HGVSg | CHROMOSOME_IV:g.17328100_17328113delinsGGATGAATATAATG | |||||||
| Sequence_details | SMap | S_parent | Sequence | C49C3 | ||||
| Flanking_sequences | TACCAGAACCATGCTCACATTCAATATCCC | TTGTAGCTAACTCAGGGGATGGAGGTGTAA | ||||||
| Mapping_target | C49C3 | |||||||
| Source_location | 225 | CHROMOSOME_IV | 17328063 | 17328076 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | GGATGAATATAATG | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00008194 | ||||||
| Transcript | C49C3.4c.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | |||||||
| HGVSc | C49C3.4c.1:c.2364_2377delinsGGATGAATATAATG | |||||||
| HGVSp | CE50538:p.Glu789_Ile793delinsAspGluTyrAsnVal | |||||||
| cDNA_position | 2363-2377 | |||||||
| CDS_position | 2363-2377 | |||||||
| Protein_position | 788-793 | |||||||
| Exon_number | 13/15 | |||||||
| Codon_change | cCTGAAGAGTATGATAtt/cCGGATGAATATAATGtt | |||||||
| Amino_acid_change | PEEYDI/PDEYNV | |||||||
| C49C3.4b.1 | VEP_consequence | missense_variant | ||||||
| VEP_impact | MODERATE | |||||||
| HGVSc | C49C3.4b.1:c.2553_2566delinsGGATGAATATAATG | |||||||
| HGVSp | CE48513:p.Glu852_Ile856delinsAspGluTyrAsnVal | |||||||
| cDNA_position | 2552-2566 | |||||||
| CDS_position | 2552-2566 | |||||||
| Protein_position | 851-856 | |||||||
| Exon_number | 14/16 | |||||||
| Codon_change | cCTGAAGAGTATGATAtt/cCGGATGAATATAATGtt | |||||||
| Amino_acid_change | PEEYDI/PDEYNV | |||||||
| C49C3.4a.1 | VEP_consequence | missense_variant | ||||||
| VEP_impact | MODERATE | |||||||
| HGVSc | C49C3.4a.1:c.4305_4318delinsGGATGAATATAATG | |||||||
| HGVSp | CE19743:p.Glu1436_Ile1440delinsAspGluTyrAsnVal | |||||||
| cDNA_position | 4307-4321 | |||||||
| CDS_position | 4304-4318 | |||||||
| Protein_position | 1435-1440 | |||||||
| Exon_number | 21/24 | |||||||
| Codon_change | cCTGAAGAGTATGATAtt/cCGGATGAATATAATGtt | |||||||
| Amino_acid_change | PEEYDI/PDEYNV | |||||||
| Method | WGS_Flibotte |
