WormBase Tree Display for Variation: WBVar02093815
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WBVar02093815 | Name | Public_name | WBVar02093815 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00823791 | |||||||
CE53955:p.Ser123_Gln126delinsMetValSerGlu | ||||||||
F42G2.4.1:c.368_376delinsTGGTGTCTG | ||||||||
HGVSg | CHROMOSOME_II:g.2412366_2412374delinsCAGACACCA | |||||||
Sequence_details | SMap | S_parent | Sequence | F42G2 | ||||
Flanking_sequences | TATAAACAGGAACTCCTTTTTGTTGTTTTT | TTTTGATCTGCTCGTGAACGCGGTCTGCAG | ||||||
Mapping_target | F42G2 | |||||||
Source_location | 225 | CHROMOSOME_II | 2412371 | 2412379 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CAGACACCA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018353 | ||||||
Transcript | F42G2.4.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F42G2.4.1:c.368_376delinsTGGTGTCTG | |||||||
HGVSp | CE53955:p.Ser123_Gln126delinsMetValSerGlu | |||||||
cDNA_position | 376-385 | |||||||
CDS_position | 368-377 | |||||||
Protein_position | 123-126 | |||||||
Exon_number | 2/8 | |||||||
Codon_change | aGTTTGTGGCAa/aTGGTGTCTGAa | |||||||
Amino_acid_change | SLWQ/MVSE | |||||||
Method | WGS_Flibotte |