WormBase Tree Display for Variation: WBVar02086119
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WBVar02086119 | Name | Public_name | WBVar02086119 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00815855 | |||||||
F56D12.1c.1:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | ||||||||
F56D12.1b.1:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | ||||||||
F56D12.1a.2:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | ||||||||
F56D12.1a.1:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | ||||||||
F56D12.1d.1:c.258+65_258+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | ||||||||
HGVSg | CHROMOSOME_II:g.1308652_1308680delinsTTCAGCTTAATTTAGCAATTTTTTCC | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | TCTACAAAACCAAATCGGCAAATTTGAGGA | GAAATTTTCAAATTTTCATCACGAATTTCG | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1308659 | 1308687 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTCAGCTTAATTTAGCAATTTTTTCC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1b.1:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | |||||||
Intron_number | 5/7 | |||||||
F56D12.1a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1a.2:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | |||||||
Intron_number | 6/9 | |||||||
F56D12.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1a.1:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | |||||||
Intron_number | 5/8 | |||||||
F56D12.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1d.1:c.258+65_258+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | |||||||
Intron_number | 1/3 | |||||||
F56D12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1c.1:c.678+65_678+93delinsGGAAAAAATTGCTAAATTAAGCTGAA | |||||||
Intron_number | 4/5 | |||||||
Method | WGS_Flibotte |