WormBase Tree Display for Variation: WBVar02084150
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| WBVar02084150 | Name | Public_name | WBVar02084150 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00813819 | |||||||
| F56D12.1b.1:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | ||||||||
| F56D12.1c.1:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | ||||||||
| F56D12.1a.1:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | ||||||||
| F56D12.1a.2:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | ||||||||
| HGVSg | CHROMOSOME_II:g.1309388_1309431delinsTGGAAAATGGGAATAATTCCCCGAGAGAAAATTTTC | |||||||
| Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
| Flanking_sequences | TCTGAAATAGTAAAATATTGAAAATTTAGG | GCAATGTCTGCGTCTCTTCTACCGCTGCTA | ||||||
| Mapping_target | F56D12 | |||||||
| Source_location | 225 | CHROMOSOME_II | 1309395 | 1309438 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | TGGAAAATGGGAATAATTCCCCGAGAGAAAATTTTC | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000112 | ||||||
| Transcript | F56D12.1b.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | F56D12.1b.1:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | |||||||
| Intron_number | 2/7 | |||||||
| F56D12.1a.2 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | F56D12.1a.2:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | |||||||
| Intron_number | 3/9 | |||||||
| F56D12.1a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | F56D12.1a.1:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | |||||||
| Intron_number | 2/8 | |||||||
| F56D12.1c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | F56D12.1c.1:c.178-73_178-30delinsGAAAATTTTCTCTCGGGGAATTATTCCCATTTTCCA | |||||||
| Intron_number | 1/5 | |||||||
| Method | WGS_Flibotte |
