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WormBase Tree Display for Variation: WBVar02084145

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Name Class

WBVar02084145NamePublic_nameWBVar02084145
Other_namecewivar00813814
F56D12.1a.1:c.1503_1509delinsTGGAAAT
F56D12.1d.1:c.1083_1089delinsTGGAAAT
F56D12.1b.1:c.*532_*538delinsTGGAAAT
F56D12.1a.2:c.1503_1509delinsTGGAAAT
CE29047:p.ValGlyAsnMet501=
CE40074:p.ValGlyAsnMet361=
HGVSgCHROMOSOME_II:g.1306568_1306574delinsATTTCCA
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesTGATCCAGTTGATTTGTCGTTGAGGTACATACGGCGTCGCGGAGAACATCGCGAGCTCTG
Mapping_targetF56D12
Source_location225CHROMOSOME_II13065751306581From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionATTTCCA
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF56D12.1b.1:c.*532_*538delinsTGGAAAT
cDNA_position2073-2080
Exon_number8/8
F56D12.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.2:c.1503_1509delinsTGGAAAT
HGVSpCE29047:p.ValGlyAsnMet501=
cDNA_position1602-1609
CDS_position1503-1510
Protein_position501-504
Exon_number9/10
Codon_changegtCGGCAACAtg/gtTGGAAATAtg
Amino_acid_changeVGNM
F56D12.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.1:c.1503_1509delinsTGGAAAT
HGVSpCE29047:p.ValGlyAsnMet501=
cDNA_position1506-1513
CDS_position1503-1510
Protein_position501-504
Exon_number8/9
Codon_changegtCGGCAACAtg/gtTGGAAATAtg
Amino_acid_changeVGNM
F56D12.1d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1d.1:c.1083_1089delinsTGGAAAT
HGVSpCE40074:p.ValGlyAsnMet361=
cDNA_position1083-1090
CDS_position1083-1090
Protein_position361-364
Exon_number4/4
Codon_changegtCGGCAACAtg/gtTGGAAATAtg
Amino_acid_changeVGNM
MethodWGS_Flibotte