WormBase Tree Display for Variation: WBVar02083479
expand all nodes | collapse all nodes | view schema
WBVar02083479 | Name | Public_name | WBVar02083479 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00813131 | |||||||
F38B2.1c.1:c.447-16_447-13delinsTTTTTCTTTC | ||||||||
F38B2.1b.1:c.471-16_471-13delinsTTTTTCTTTC | ||||||||
F38B2.1a.1:c.471-16_471-13delinsTTTTTCTTTC | ||||||||
F38B2.1d.1:c.522-16_522-13delinsTTTTTCTTTC | ||||||||
F38B2.1e.1:c.558-16_558-13delinsTTTTTCTTTC | ||||||||
HGVSg | CHROMOSOME_X:g.11273921_11273924delinsTTTTTCTTTC | |||||||
Sequence_details | SMap | S_parent | Sequence | C03A3 | ||||
Flanking_sequences | AGCATATTACCGTTATTATACTTTTTCTAC | TGTATTTTTCAGATTGGAAGATGCCACCAA | ||||||
Mapping_target | C03A3 | |||||||
Source_location | 225 | CHROMOSOME_X | 11273857 | 11273860 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTTTTCTTTC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (18) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002050 | ||||||
Transcript | F38B2.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1b.1:c.471-16_471-13delinsTTTTTCTTTC | |||||||
Intron_number | 6/10 | |||||||
F38B2.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1d.1:c.522-16_522-13delinsTTTTTCTTTC | |||||||
Intron_number | 5/8 | |||||||
F38B2.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1a.1:c.471-16_471-13delinsTTTTTCTTTC | |||||||
Intron_number | 6/10 | |||||||
F38B2.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1e.1:c.558-16_558-13delinsTTTTTCTTTC | |||||||
Intron_number | 5/9 | |||||||
F38B2.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1c.1:c.447-16_447-13delinsTTTTTCTTTC | |||||||
Intron_number | 5/9 | |||||||
Method | WGS_Flibotte |