WormBase Tree Display for Variation: WBVar02079799
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WBVar02079799 | Name | Public_name | WBVar02079799 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00809112 | |||||||
HGVSg | CHROMOSOME_II:g.882189_885507delinsTGGAAAAAATTAATAATTTC | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | GGATGGTAGTTTTGAGAGAAATTTGGAAAT | CAGATAGAGGACTCGTTAGAGTTTACTGCA | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 882196 | 885514 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGGAAAAAATTAATAATTTC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020308 | ||||||
WBGene00020309 | ||||||||
Pseudogene | T07D3.6 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,non_coding_transcript_exon_variant,intron_variant | |||||
VEP_impact | HIGH | |||||||
Intron_number | 7-9/9 | |||||||
Exon_number | 8-10/10 | |||||||
T07D3.5 | VEP_consequence | splice_donor_variant,non_coding_transcript_exon_variant,intron_variant | ||||||
VEP_impact | HIGH | |||||||
Intron_number | 1/3 | |||||||
Exon_number | 1/4 | |||||||
Method | WGS_Flibotte |