WormBase Tree Display for Variation: WBVar02078477
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WBVar02078477 | Name | Public_name | WBVar02078477 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00807790 | |||||||
F53A10.2a.1:c.312+3575_312+3904del | ||||||||
F53A10.2b.3:c.-787+3575_-787+3904del | ||||||||
F53A10.2d.1:c.129+3575_129+3904del | ||||||||
F53A10.2b.1:c.-787+3575_-787+3904del | ||||||||
HGVSg | CHROMOSOME_II:g.1215007_1215336del | |||||||
Sequence_details | SMap | S_parent | Sequence | F53A10 | ||||
Flanking_sequences | ATTTTGTTAAAAAGCTCAACTTTTTCGACA | TTTTTATTTCAAAATTCGAAGTCATCATCA | ||||||
Mapping_target | F53A10 | |||||||
Source_location | 225 | CHROMOSOME_II | 1215014 | 1215343 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018734 | ||||||
Transcript | F53A10.2d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A10.2d.1:c.129+3575_129+3904del | |||||||
Intron_number | 2/9 | |||||||
F53A10.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A10.2b.1:c.-787+3575_-787+3904del | |||||||
Intron_number | 3/12 | |||||||
F53A10.2b.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A10.2b.3:c.-787+3575_-787+3904del | |||||||
Intron_number | 2/11 | |||||||
F53A10.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53A10.2a.1:c.312+3575_312+3904del | |||||||
Intron_number | 4/12 | |||||||
Method | WGS_Flibotte |