WormBase Tree Display for Variation: WBVar02077093
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WBVar02077093 | Name | Public_name | WBVar02077093 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00806406 | |||||||
C49C3.4a.1:c.1533_1695delinsTTCG | ||||||||
CE19743:p.Thr512_Ala565delinsSer | ||||||||
HGVSg | CHROMOSOME_IV:g.17323190_17323352delinsTTCG | |||||||
Sequence_details | SMap | S_parent | Sequence | C49C3 | ||||
Flanking_sequences | AGCCTCAACAACAACAGGAGAAGCTTCTTC | ACATCTGTAGCAGCCACGACTTCATCAGCT | ||||||
Mapping_target | C49C3 | |||||||
Source_location | 225 | CHROMOSOME_IV | 17323153 | 17323315 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTCG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008194 | ||||||
Transcript | C49C3.4a.1 | VEP_consequence | protein_altering_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C49C3.4a.1:c.1533_1695delinsTTCG | |||||||
HGVSp | CE19743:p.Thr512_Ala565delinsSer | |||||||
cDNA_position | 1536-1698 | |||||||
CDS_position | 1533-1695 | |||||||
Protein_position | 511-565 | |||||||
Exon_number | 8/24 | |||||||
Codon_change | tcAACAACAACAGGAGAAGCTTCTTCAACAACAACAGGAGAAGCTTCTTCAACAACAACAGGAGAAGCTTCTTCAACAACAACAGGAGAAGCTTCTTCAACAACAACAGGAGAAGCTTCTTCAACAACAACAGGAGAAGCTTCTTCAACAACAACAGGAGAAGCT/tcTTCG | |||||||
Amino_acid_change | STTTGEASSTTTGEASSTTTGEASSTTTGEASSTTTGEASSTTTGEASSTTTGEA/SS | |||||||
Method | WGS_Flibotte |